Assume missing off-diagonal covariance values are zero #98
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In some cases, we might have covariance matrices that have only diagonal elements defined with the off-diagonal elements missing (represented as NaNs). Some input coordinates may represent datasets that do not explicitly calculate off-diagonal (covariance) values, but we still want to be able to calculate chi2 for those coordinates using the diagonal (variance) values. In these instances, this PR modifies the residuals code to assume those missing values are zero and emits a warning when this occurs.