Releases: BCCDC-PHL/taxon-abundance
Releases · BCCDC-PHL/taxon-abundance
v0.1.8
- Removed defaults channel (Issue #40 )
v0.1.7
- Updated provenance format to match current pipeline provenance schema (Issue #33)
- Removed support for
--versioned_outdir
parameter (Issue #35)
- Bumped memory allocation for kraken to 73 GB (Issue #36)
v0.1.6
- Added support for abundance estimates at multiple taxonomic levels (Issue #31)
v0.1.5
- Add
--collect_outputs
flag to collect outputs from all samples into single file (Issue #28)
v0.1.4
- Added option to skip bracken analysis using the
--skip_bracken
flag (Issue #22)
- Exposed kraken2
--confidence
flag, with default value same as kraken2 default (0.0
) (Issue #25)
v0.1.3
- Bumped memory allocated to kraken2 to 64 GB (Issue #24)
v0.1.2
- Added
memory
directive to reserve sufficient memory for the 'standard' kraken2 database
v0.1.1
- Fixed issue that caused pipeline to crash when the
--extract_reads
flag was used (Issue #19)