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@BIONF

BIONF

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  1. PhyloProfile PhyloProfile Public

    A phylogenetic profile analysis tool

    R 33 10

  2. HaMStR HaMStR Public

    Feature-aware orthology prediction tool. Provided data package: Quest for Orthologs reference gene sets 2019.

    Perl 9 2

  3. fDOG fDOG Public

    Feature-aware Directed OrtholoG search

    Python 9 3

  4. protTrace protTrace Public

    A simulation based framework to estimate the evolutionary traceability of protein.

    Python 5 4

  5. FAS FAS Public

    FAS - Tool for Feature Architecture Similarity calculation

    Python 5 1

  6. RScaffolder RScaffolder Public

    Multi-Reference Assisted Bacterial Genome Scaffolder

    Python 3 1

Repositories

Showing 10 of 36 repositories
  • PhyloProfile Public

    A phylogenetic profile analysis tool

    BIONF/PhyloProfile’s past year of commit activity
    R 33 10 9 0 Updated Dec 20, 2024
  • fDOG Public

    Feature-aware Directed OrtholoG search

    BIONF/fDOG’s past year of commit activity
    Python 9 GPL-3.0 3 4 0 Updated Dec 9, 2024
  • cell_wall Public
    BIONF/cell_wall’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Dec 3, 2024
  • taXaminer Public Forked from fdarthen/taXaminer

    Interactive exploration of biodiverse genome assemblies

    BIONF/taXaminer’s past year of commit activity
    Python 2 MIT 2 0 0 Updated Dec 2, 2024
  • XspecT2 Public

    XspecT is a very fast, memory efficient and easy-to-use tool to taxonomically classify raw sequence-data, whole genome assemblies or metagenomes on the species level

    BIONF/XspecT2’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 14, 2024
  • bionf_cookiecutter Public Forked from patrickmineault/true-neutral-cookiecutter

    A minimalist cookiecutter for research and data science projects

    BIONF/bionf_cookiecutter’s past year of commit activity
    Python 0 GPL-3.0 33 0 0 Updated Nov 8, 2024
  • FAS Public

    FAS - Tool for Feature Architecture Similarity calculation

    BIONF/FAS’s past year of commit activity
    Python 5 GPL-3.0 1 3 0 Updated Sep 5, 2024
  • BIONF/digital_competence’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Mar 26, 2024
  • PhyloProfileCorona Public Forked from trvinh/PhyloProfileCorona

    Lite version of PhyloProfile for corona data

    BIONF/PhyloProfileCorona’s past year of commit activity
    R 0 MIT 2 0 0 Updated Feb 19, 2024
  • PhyloRBF Public Forked from trvinh/PhyloProfileRibi
    BIONF/PhyloRBF’s past year of commit activity
    R 0 MIT 1 0 0 Updated Feb 19, 2024

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