Merge branch 'main' into my_branch

README.rst

@@ -34,7 +34,7 @@ that you are running simulations with sensible parameters.
 .. |build| image:: https://github.com/Becksteinlab/GromacsWrapper/actions/workflows/ci.yaml/badge.svg?branch=main
    :target: https://github.com/Becksteinlab/GromacsWrapper/actions/workflows/ci.yaml
    :alt: Build Status	     
-.. |cov| image:: https://codecov.io/gh/Becksteinlab/GromacsWrapper/branch/main/graph/badge.svg?token=LvbLZ49wxN
+.. |cov| image:: https://codecov.io/gh/Becksteinlab/GromacsWrapper/graph/badge.svg?token=LvbLZ49wxN
    :target: https://codecov.io/gh/Becksteinlab/GromacsWrapper
    :alt: Code Coverage
 .. |zenodo| image:: https://zenodo.org/badge/13219/Becksteinlab/GromacsWrapper.svg

codecov.yml

@@ -0,0 +1,22 @@
+codecov:
+  branch: main
+
+coverage:
+  status:
+    project:
+      default: false
+      tests:
+        paths: ["tests/"]
+        target: 100%
+      package:
+        paths: ["gromacs/"]
+    patch:
+      default: false
+      test:
+        paths: ["tests/"]
+        target: 100%
+        threshold: 0%
+      package: 
+        paths: ["gromacs/"]
+        target: auto
+        threshold: 0%