new options in config

BioInf2305 · Jun 24, 2023 · 45a3511 · 45a3511
1 parent 80307a1
commit 45a3511
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diff --git a/nextflow.config b/nextflow.config
@@ -20,6 +20,7 @@ params {
     dbsnp                      = null
     batch_size                 = 10
     add_gvcf                   = true
+    target_pos_file            = null
 
 
 

diff --git a/nextflow_schema.json b/nextflow_schema.json
@@ -75,6 +75,11 @@
                 "add_gvcf": {
                     "type": "boolean",
                     "description": "Whether or not to add gvcf"
+                },
+                "target_pos_file": {
+                    "type": "string",
+                    "default": "na",
+                    "description": "path to the file containing target positions"
                 }
             }
         },