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Improve heuristics of translating ambiguous nucs #280

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merged 1 commit into from
Sep 26, 2023

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Use a more principled approach, such that we now guarantee that ambiguous DNA
and RNA is translated to exactly the set of amino acids the genetic code
corresponds to.

Use a more principled approach, such that we now guarantee that ambiguous DNA
and RNA is translated to exactly the set of amino acids the genetic code
corresponds to.
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codecov bot commented Jul 22, 2023

Codecov Report

Patch coverage: 87.50% and project coverage change: -0.47 ⚠️

Comparison is base (1ccb602) 91.21% compared to head (d5f81d6) 90.75%.

Additional details and impacted files
@@            Coverage Diff             @@
##           master     #280      +/-   ##
==========================================
- Coverage   91.21%   90.75%   -0.47%     
==========================================
  Files          31       31              
  Lines        2403     2401       -2     
==========================================
- Hits         2192     2179      -13     
- Misses        211      222      +11     
Flag Coverage Δ
unittests 90.75% <87.50%> (-0.47%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
src/geneticcode.jl 80.53% <87.50%> (-6.32%) ⬇️

... and 3 files with indirect coverage changes

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@jakobnissen jakobnissen merged commit 4839f27 into BioJulia:master Sep 26, 2023
24 of 28 checks passed
@jakobnissen jakobnissen deleted the trans_heur branch September 26, 2023 11:25
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