Skip to content

Issues: BioPandas/biopandas

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

21 Open 38 Closed
21 Open 38 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Adding possibility for a collection of structures
#142 opened Apr 29, 2024 by gezmi
1
[RFC] Enabling Cython-based PDB parser backend for speed improvements
#139 opened Aug 29, 2023 by a-r-j
4
read_pdb_from_list() not containing newlines
#130 opened Jun 29, 2023 by uros-sipetic
SettingWithCopyWarning
#127 opened Apr 25, 2023 by tommycarstensen
Unable to export PDB DFs with model_id columns
#124 opened Apr 21, 2023 by a-r-j
[Refactor] Reduce code duplication by using abstract base classes enhancement help wanted
#117 opened Mar 27, 2023 by a-r-j
Using SIFTS data for renumbering residues to match the Uniprot sequence resids
#110 opened Aug 18, 2022 by mrauha
1
Biopandas PDB output formatting leads to a ton of segments when reading with MDAnalysis: reason and my quick fix bug help wanted
#109 opened Aug 18, 2022 by mrauha
1
RMSD calculation for whole PDBs enhancement
#69 opened Oct 9, 2020 by LivC193
3
column 'line_idx' gets 'object' d_type for empty frames.
#64 opened Jun 4, 2020 by ZivBA
Missing files in the PyPi tarball
#63 opened May 10, 2020 by moorepants
2
Mol2 files bonds enhancement
#54 opened Jul 6, 2018 by btyukodi
8
Merging HETATM and ATOM entries into one DataFrame bug enhancement
#53 opened May 31, 2018 by rasbt
Renumbering residues enhancement
#51 opened May 25, 2018 by ajasja
9
Handling multi-PDB files bug enhancement
#50 opened Apr 4, 2018 by rasbt
Add/Parse Information about Secondary Structure Elements enhancement
#40 opened Jun 15, 2017 by rasbt
Improve RMSD function to take molecular symmetry into consideration? enhancement
#13 opened Nov 18, 2016 by ravila4
1
Adding a function to compute the lengths and angles of the bonds in the (PDB) molecule enhancement
#11 opened Nov 25, 2015 by rasbt
Adding a function for Q-Score computation enhancement
#8 opened Nov 24, 2015 by rasbt
Adding a SDF submodule and DataFrames enhancement
#7 opened Nov 24, 2015 by rasbt
Add function for structural alignments via least-squares fit enhancement
#5 opened Nov 24, 2015 by rasbt
4
ProTip! Type g i on any issue or pull request to go back to the issue listing page.