try podman

jenkins/RemoteExtraction

@@ -38,22 +38,42 @@ pipeline {
                 sh """
                 mkdir -p ${WORKSPACE}/extpar
                 mkdir -p ${WORKSPACE}/icontools
+                cp namelist ${WORKSPACE}/icontools/namelist
                 """
             }
         }
         stage('Generate ICON grid') {
             steps {
                 sh """ 
                 cd ${WORKSPACE}/icontools
-                echo "Generating ICON grid"
+                podman run  -w /work -u 0 -v ${WORKSPACE}/icontools:/work -t icontools /home/dwd/icontools/icongridgen --nml /work/namelist
+
+
                 """
             }
         }
         stage('Generate external parameters') {
             steps {
                 sh """ 
                 cd ${WORKSPACE}/extpar
-                echo "Generating external parameters"
+                podman run \
+                    -v /c2sm-data/extpar-input-data:/data \
+                    -v ${WORKSPACE}/icontools:/grid \
+                    -v ${WORKSPACE}/extpar:/work \
+                    extpar-image \
+                    python3 -m extpar.WrapExtpar \
+                    --run_dir /work \
+                    --raw_data_path /data/linked_data \
+                    --no_batch_job \
+                    --host docker \
+                    --input_grid /grid/icon_uzbekistan_DOM01.nc  \
+                    --igrid_type 1 \
+                    --iaot_type 1 \
+                    --ilu_type 2 \
+                    --ialb_type 1 \
+                    --account none \
+                    --isoil_type 1 \
+                    --itopo_type 2
                 """
             }
         }

namelist

@@ -0,0 +1,26 @@
+&gridgen_nml
+  centre              = 1
+  subcentre           = 2
+  lspring_dynamics    = .false.
+  maxit               = 10000
+  parent_id           = 0,1
+  basegrid%grid_root   = 3
+  basegrid%grid_level  = 5
+  initial_refinement = .false.
+  dom(1)%outfile = "icon_uzbekistan"
+  dom(1)%region_type  = 3
+  dom(1)%center_lon   = 63.5
+  dom(1)%center_lat   = 42.16
+  dom(1)%hwidth_lon   = 20.0
+  dom(1)%hwidth_lat   = 20.0
+  dom(1)%number_of_grid_used = 99
+  dom(1)%lwrite_parent = .false.
+  dom(2)%outfile = "icon_uzbekistan"
+  dom(2)%region_type  = 3
+  dom(2)%center_lon   = 63.5
+  dom(2)%center_lat   = 42.16
+  dom(2)%hwidth_lon   = 5.0
+  dom(2)%hwidth_lat   = 5.0
+  dom(2)%number_of_grid_used = 99
+/
+