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adding python/3.7 module for new recall rule
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kopardev committed May 18, 2021
1 parent e819c3f commit 555be96
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2 changes: 1 addition & 1 deletion workflow/Snakefile
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Expand Up @@ -788,7 +788,7 @@ rule recall_valid_BSJ_split_BAM_by_strand_create_BW:
pythonscript=join(SCRIPTS_DIR,"validate_BSJ_reads_and_split_BSJ_bam_by_strand.py"),
regions=config['regions']
threads: 2
envmodules: TOOLS["samtools"]["version"],TOOLS["bedtools"]["version"],TOOLS["ucsc"]["version"],TOOLS["sambamba"]["version"]
envmodules: TOOLS["samtools"]["version"],TOOLS["bedtools"]["version"],TOOLS["ucsc"]["version"],TOOLS["sambamba"]["version"],TOOLS["python37"]["version"]
shell:"""
cd {params.outdir}
bam_basename="$(basename {input.bam})"
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