Merge pull request #122 from CCBR/iss-120

fix: update rseqc module to v4.0.0

CHANGELOG.md

@@ -1,8 +1,10 @@
+
 ## RENEE development version
 
-- Fix: RNA report bug, caused by hard-coding of PC1-3, when only PC1-2 were generated (#104, @slsevilla)
 - Minor documentation improvements. (#100, @kelly-sovacool)
-- Fix: allow printing the version or help message even if singularity is not in the path. (#110, @kelly-sovacool)
+- Fix RNA report bug, caused by hard-coding of PC1-3, when only PC1-2 were generated. (#104, @slsevilla)
+- Allow printing the version or help message even if singularity is not in the path. (#110, @kelly-sovacool)
+- Set RSeQC envmodule version to 4.0.0, which synchronizes it with the version in the docker container used by singularity. (#122, @kelly-sovacool)
 
 ## RENEE 2.5.11
 

config/templates/tools.json

@@ -21,7 +21,7 @@
                 "PYTHONVER": "python/3.5",
                 "QUALIMAPVER": "qualimap/2.2.1",
                 "RSEMVER": "rsem/1.3.0",
-                "RSEQCVER": "rseqc/2.6.4",
+                "RSEQCVER": "rseqc/4.0.0",
                 "RVER": "R/3.5",
                 "SAMTOOLSVER": "samtools/1.6",
                 "STARVER": "STAR/2.7.6a",