ci: run update-citation-cff action on PRs & use pre-commit hooks

.github/workflows/update-citation-cff.yaml

@@ -7,9 +7,10 @@
 on:
   release:
     types: [published]
-  push:
+  pull_request:
     branches: [master, main]
     paths:
+      - .github/workflows/update-citation-cff.yaml
       - DESCRIPTION
       - inst/CITATION
   workflow_dispatch:
@@ -23,12 +24,16 @@ jobs:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
     steps:
       - uses: actions/checkout@v3
+        with:
+          ref: ${{ github.head_ref }}
+          fetch-depth: 0
       - uses: r-lib/actions/setup-r@v2
       - uses: r-lib/actions/setup-r-dependencies@v2
         with:
           extra-packages: |
             any::cffr
             any::V8
+            any::docopt
 
       - name: Update CITATION.cff
         run: |
@@ -45,7 +50,10 @@ jobs:
           cff_write(keys = mykeys)
 
         shell: Rscript {0}
-
+      - uses: pre-commit/[email protected]
+        with:
+          extra_args: --files CITATION.cff
+        continue-on-error: true
       - name: Commit results
         run: |
           git config --local user.name "github-actions[bot]"

CITATION.cff

@@ -142,6 +142,21 @@ references:
         email: [email protected]
         orcid: https://orcid.org/0000-0002-6983-2759
     year: "2024"
+  - type: software
+    title: styler
+    abstract: "styler: Non-Invasive Pretty Printing of R Code"
+    notes: Suggests
+    url: https://styler.r-lib.org
+    repository: https://CRAN.R-project.org/package=styler
+    authors:
+      - family-names: Müller
+        given-names: Kirill
+        email: [email protected]
+        orcid: https://orcid.org/0000-0002-1416-3412
+      - family-names: Walthert
+        given-names: Lorenz
+        email: [email protected]
+    year: "2024"
   - type: software
     title: testthat
     abstract: "testthat: Unit Testing for R"
@@ -154,3 +169,27 @@ references:
         email: [email protected]
     year: "2024"
     version: ">= 3.0.0"
+  - type: software
+    title: usethis
+    abstract: "usethis: Automate Package and Project Setup"
+    notes: Suggests
+    url: https://usethis.r-lib.org
+    repository: https://CRAN.R-project.org/package=usethis
+    authors:
+      - family-names: Wickham
+        given-names: Hadley
+        email: [email protected]
+        orcid: https://orcid.org/0000-0003-4757-117X
+      - family-names: Bryan
+        given-names: Jennifer
+        email: [email protected]
+        orcid: https://orcid.org/0000-0002-6983-2759
+      - family-names: Barrett
+        given-names: Malcolm
+        email: [email protected]
+        orcid: https://orcid.org/0000-0003-0299-5825
+      - family-names: Teucher
+        given-names: Andy
+        email: [email protected]
+        orcid: https://orcid.org/0000-0002-7840-692X
+    year: "2024"

DESCRIPTION

@@ -22,7 +22,9 @@ Imports:
     tidyr
 Suggests:
     readr,
-    testthat (>= 3.0.0)
+    styler,
+    testthat (>= 3.0.0),
+    usethis
 biocViews:
 Config/testthat/edition: 3
 Encoding: UTF-8