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adds galaxy-qa1 instance specific files
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,27 @@ | ||
| #! vim: ts=2 expandtab: | ||
|
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| name: run-ansible-playbook | ||
|
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| runs: | ||
| using: 'composite' | ||
| steps: | ||
| - name: Make SSH connection | ||
| shell: bash | ||
| run: | | ||
| mkdir -p $HOME/.ssh | ||
| install -m 600 -D /dev/null $HOME/.ssh/id_rsa | ||
| echo "$SSH_PRIVATE_KEY" > $HOME/.ssh/id_rsa | ||
| cp known_hosts $HOME/.ssh/known_hosts | ||
| ssh -f -o StrictHostKeyChecking=no $TARGET_USER@$TARGET_HOSTNAME hostname | ||
| - name: Install Ansible requirements | ||
| shell: bash | ||
| run: ansible-galaxy install -p roles -r requirements.yml | ||
|
|
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| - name: Create vault password | ||
| shell: bash | ||
| run: echo "$VAULT_PASSWORD" >.vault-password.txt | ||
|
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| - name: Run playbook | ||
| shell: bash | ||
| run: ansible-playbook --limit $TARGET_HOSTNAME galaxy.yml |
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|---|---|---|
| @@ -0,0 +1,21 @@ | ||
| #! vim: ts=2 expandtab: | ||
|
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| name: deploy-qa1-ansible | ||
|
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| # TODO: run automatically on push to main | ||
| on: [ workflow_dispatch ] | ||
|
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| jobs: | ||
| call-common: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout actions | ||
| uses: actions/checkout@v2 | ||
|
|
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| - name: Call run-ansible-playbook action | ||
| uses: ./.github/actions/run-ansible-playbook | ||
| env: | ||
| TARGET_HOSTNAME: galaxy-qa1.galaxy.cloud.e-infra.cz | ||
| TARGET_USER: debian | ||
| VAULT_PASSWORD: ${{ secrets.VAULT_PASSWORD_QA1 }} | ||
| SSH_PRIVATE_KEY: ${{ secrets.SSH_PRIVATE_KEY_QA1 }} |
9 changes: 9 additions & 0 deletions
9
files/galaxy-qa1.galaxy.cloud.e-infra.cz/object_store_conf.xml.j2
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| @@ -0,0 +1,9 @@ | ||
| <?xml version="1.0"?> | ||
| <object_store type="hierarchical"> | ||
| <backends> | ||
| <backend id="localdata" type="disk" order="0"> | ||
| <files_dir path="{{ galaxy_mutable_data_dir }}/datasets" /> | ||
| <extra_dir type="job_work" path="{{ galaxy_mutable_data_dir }}/jobs" /> | ||
| </backend> | ||
| </backends> | ||
| </object_store> |
10 changes: 10 additions & 0 deletions
10
files/galaxy-qa1.galaxy.cloud.e-infra.cz/oidc_backends_config.xml
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| <?xml version="1.0"?> | ||
| <OIDC> | ||
| <provider name="Keycloak"> | ||
| <client_id>{{ oidc_client_id }}</client_id> | ||
| <client_secret>{{ oidc_client_secret }}</client_secret> | ||
| <redirect_uri>https://{{ inventory_hostname }}/authnz/keycloak/callback</redirect_uri> | ||
| <url>https://login.e-infra.cz/oidc</url> | ||
| <icon>https://www.e-infra.cz/img/logo.svg</icon> | ||
| </provider> | ||
| </OIDC> |
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| @@ -0,0 +1 @@ | ||
| ssh-rsa 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 galaxy@ljocha-gxit |
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| tools: | ||
| - name: iedb_api | ||
| owner: iuc | ||
| revisions: | ||
| - 7ed6dda64a81 | ||
| tool_panel_section_label: Get Data | ||
| tool_shed_url: toolshed.g2.bx.psu.edu | ||
| - name: dbbuilder | ||
| owner: galaxyp | ||
| revisions: | ||
| - 983bf725dfc2 | ||
| tool_panel_section_label: Get Data | ||
| tool_shed_url: toolshed.g2.bx.psu.edu | ||
| - name: sra_tools | ||
| owner: iuc | ||
| revisions: | ||
| - 734abc7ac21d | ||
| - f5ea3ce9b9b0 | ||
| tool_panel_section_label: Get Data | ||
| tool_shed_url: toolshed.g2.bx.psu.edu |
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|---|---|---|
| @@ -0,0 +1,5 @@ | ||
| # empty intentionally | ||
|
|
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| # prevent tpv lint complaints | ||
| global: | ||
| default_inherits: default |
185 changes: 173 additions & 12 deletions
185
host_vars/galaxy-qa1.galaxy.cloud.e-infra.cz/secret.yml
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| @@ -1,13 +1,174 @@ | ||
| $ANSIBLE_VAULT;1.1;AES256 | ||
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