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Computational Omics Lab

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  • School of Informatics and Computing, Indiana University Bloomington

Popular repositories Loading

  1. msCRUSH msCRUSH Public

    mass spectrum ClusteRing Using locality Sensitive Hashing

    C++ 8 7

  2. Graph2Pro Graph2Pro Public

    A graph-centric approach for metagenome-guided peptide identification in metaproteomics

    C++ 7 1

  3. ClonalTREE ClonalTREE Public

    Python 4 2

  4. graph2pro-var graph2pro-var Public

    C++ 2 4

  5. msSLASH msSLASH Public

    Spectral library searching tool based on locality sensitive hashing

    C++ 2 2

  6. GRASPER GRASPER Public

    GRASPER: Genome Rearrangement Analysis using Short Paired-End Reads

    Java 1 3

Repositories

Showing 10 of 14 repositories
  • msSLASH Public

    Spectral library searching tool based on locality sensitive hashing

    COL-IU/msSLASH’s past year of commit activity
    C++ 2 GPL-3.0 2 1 0 Updated Sep 24, 2022
  • msCRUSH Public

    mass spectrum ClusteRing Using locality Sensitive Hashing

    COL-IU/msCRUSH’s past year of commit activity
    C++ 8 GPL-3.0 7 4 0 Updated Nov 18, 2020
  • ClonalTREE2 Public
    COL-IU/ClonalTREE2’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 5, 2020
  • GlycoSLASH Public
    COL-IU/GlycoSLASH’s past year of commit activity
    0 1 0 0 Updated Jul 23, 2020
  • graph2pro-var Public
    COL-IU/graph2pro-var’s past year of commit activity
    C++ 2 GPL-3.0 4 3 1 Updated Jul 29, 2019
  • mgescan Public Forked from MGEScan/mgescan

    A Galaxy based system for identifying retrotransposons in genome

    COL-IU/mgescan’s past year of commit activity
    Perl 0 GPL-3.0 5 0 0 Updated Jul 2, 2019
  • MA-pipeline Public
    COL-IU/MA-pipeline’s past year of commit activity
    Java 0 0 0 0 Updated May 8, 2019
  • ClonalTREE Public
    COL-IU/ClonalTREE’s past year of commit activity
    Python 4 GPL-3.0 2 0 0 Updated Mar 26, 2019
  • MA-baseline Public

    programs to compute/count baseline parameters given reference genome and gene model (ptt)

    COL-IU/MA-baseline’s past year of commit activity
    Java 0 0 0 0 Updated Mar 11, 2018
  • Graph2Pro Public

    A graph-centric approach for metagenome-guided peptide identification in metaproteomics

    COL-IU/Graph2Pro’s past year of commit activity
    C++ 7 1 5 0 Updated Jun 21, 2017
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