Salmon v1.8.0

New features & improvements

Note (June 7, 2022) : Updated release tarball to remove problematic libm that was causing illegal instruction on some architectures.

• The index command now optionally accepts a flag -n/--no-clip that will disable homopolymer clipping during reference indexing.

• Addressed an offset miscalculation; this results in further improved specificity in alevin's --sketch mode.

Fixes

• No other particular bug fixes are noted for this release.

Notes

• Legacy and deprecated Intel TBB functionality has now been removed, and salmon (and pufferfish upon which it depends) have been updated to oneAPI TBB. The current release requires a recent version of oneAPI TBB (>= 2021.4.0) library.

Full Changelog: v1.7.0...v1.8.0