use setup_micromamba #45

	name: pytest
	on:
	pull_request:
	types: [opened, synchronize, reopened, ready_for_review]
	workflow_dispatch:

	# execute commands with conda aware shell by default:
	defaults:
	run:
	shell: bash -l {0}

	jobs:
	main:
	name: pytest
	runs-on: ${{ matrix.os }}
	strategy:
	fail-fast: false
	matrix:
	os: [ubuntu-latest]
	py: ['3.8', '3.9', '3.10', '3.11']
	pandas: [ '1.*' ]
	include:
	- os: ubuntu-latest
	py: '3.10'
	pandas: '1.4'
	- os: ubuntu-latest
	py: '3.10'
	pandas: '2.*'
	steps:
	- uses: actions/checkout@v3
	with:
	fetch-depth: '0' # Fetch all history for all tags and branches

	- uses: CagtayFabry/pydeps2env@main
	with:
	file: 'pyproject.toml'
	channels: 'conda-forge'
	extras: 'test all'
	setup_requires: 'include'

	- name: Setup Conda Environment
	uses: mamba-org/[email protected]
	with:
	environment-file: ./environment.yml
	environment-name: pytcs
	cache-environment: true
	create-args: >-
	python=${{ matrix.py }}
	pandas=${{ matrix.pandas }}

	- name: activate env
	run: micromamba activate pytcs

	- name: pip installs
	run: \|
	python -m pip install -e .

	- name: run pytest
	run: \|
	pytest

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