Bonsai

Warning

Bonsai is under development in an alpha stage. Expect uneven documentation, breaking changes, and bugs until the official 1.0 release.

Analyze outbreak, antimicrobial resistance and virulence factors in bacteria.

Intended to visualize results from JASEN pipeline.

Installation

See the documentation for instructions on how to install and configure Bonsai.

Name		Name	Last commit message	Last commit date
Latest commit History 1,012 Commits
.github		.github
allele_cluster_service		allele_cluster_service
api		api
docs		docs
e2e_tests		e2e_tests
frontend		frontend
minhash_service		minhash_service
scripts		scripts
volumes		volumes
.dockerignore		.dockerignore
.editorconfig		.editorconfig
.gitignore		.gitignore
.readthedocs.yaml		.readthedocs.yaml
CHANGELOG.md		CHANGELOG.md
LICENSE		LICENSE
README.md		README.md
bootstrap.sh		bootstrap.sh
docker-compose.e2e_test.yml		docker-compose.e2e_test.yml
docker-compose.yml		docker-compose.yml