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v0.3.0

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@mhkc mhkc released this 09 Jan 15:29
· 278 commits to master since this release

[0.3.0]

Added

  • Pytest for Mycobacterium tuberculosis

Fixed

  • Reordered variant models in ElementTypeResult
  • Fixed assignment of TbProfiler variant type

Changed

  • Renamed mutations to variants
  • Removed prc_dup and dup from postAlnQc output
  • Added reference, note fields to PhenotypeInfo
  • Mykrobe output parser handles csv format instead of json
  • Split generic ResistanceVariant and ResistanceGene to one specified for individual tools
  • Include non resistance yeilding variants from tbprofiler