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v0.4.0

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@ryanjameskennedy ryanjameskennedy released this 14 Feb 09:57

[0.4.0]

Added

  • Add create-qc-result as sub arguement
  • Add QC class and parse_alignment_results to qc.py
  • Add picard, sambamba, java and r-base to Dockerfile
  • Add quartile1, median & quartile3 to postalignqc results and respective model
  • Add fx for formatting datetime for manually generated tbdbs

Fixed

  • Dockerfile python version
  • Pydantic models
  • Python version error in Dockerfile
  • Test files regarding q1, median and q3

Changed

  • Workflow that publishes to PyPI and Dockerhub separated into two workflows for testing
  • Publish to docker workflow started on completion of PyPI publishing