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Add flag to only output BAM files #213

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Add flag to only output BAM files #213

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Commits on Jul 29, 2024

  1. Add alignment_only flag

    @alkc
    alkc committed Jul 29, 2024
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  2. Don't process bam when alignment_only run

    @alkc
    alkc committed Jul 29, 2024
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  3. Add alignment_only to a few more processes

    @alkc
    alkc committed Jul 29, 2024
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  4. Add alignment_only condition to mtBAM processes

    @alkc
    alkc committed Jul 29, 2024
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  5. Don't generate yaml for align-only

    @alkc
    alkc committed Jul 29, 2024
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  6. BAM only changenotes

    @alkc
    alkc committed Jul 29, 2024
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Commits on Jul 30, 2024

  1. Update docs

    @alkc
    alkc committed Jul 30, 2024
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Commits on Aug 13, 2024

  1. Merge branch 'master' into add-align-only-flag

    @alkc
    alkc committed Aug 13, 2024
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  2. Drop QC data output from align only runs

    @alkc
    alkc committed Aug 13, 2024
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