Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

"Error: No such option: -f" message when running example #127

Open
hrydbeck opened this issue Mar 12, 2024 · 1 comment
Open

"Error: No such option: -f" message when running example #127

hrydbeck opened this issue Mar 12, 2024 · 1 comment
Assignees

Comments

@hrydbeck
Copy link

~/tmp/genmod$ genmod annotate test_data/test_vcf.vcf -f test_data/multi_family.ped -o examples/test_vcf_multi_annotated.vcf
Usage: genmod annotate [OPTIONS] <vcf_file> or -
Try 'genmod annotate --help' for help.

Error: No such option: -f

dnil added a commit that referenced this issue Oct 24, 2024
@dnil
Copy link
Collaborator

dnil commented Oct 24, 2024

Absolutely, the gist of it is there, but not the right syntax for the current version. Thank you for reporting. I hope you managed to solve the puzzle with clues from the CLI built in help.

@dnil dnil self-assigned this Oct 24, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants