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18 Open 84 Closed
18 Open 84 Closed
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Issues list

genmod score reorders variants - order not compatible with bgzip & tabix bug
#147 opened Oct 31, 2024 by fellen31
Is --whole_gene deprecated? question
#146 opened Oct 30, 2024 by fellen31
How to interpret two or more inheritance mode given for a variant?
#145 opened Oct 28, 2024 by rfarhad
Use poetry enhancement
#143 opened Oct 24, 2024 by dnil
@dnil
Scoring an empty VCF QualityOfLife
#130 opened Jul 25, 2024 by fellen31
@fellen31
Silently missing values when using integer format in rank model and encountering a float value enhancement
#128 opened Mar 19, 2024 by Jakob37
2
"Error: No such option: -f" message when running example Documentation
#127 opened Mar 12, 2024 by hrydbeck
@dnil
1
Phased models bugged? bug
#126 opened Jan 11, 2024 by dnil
@fellen31
Change or document AR_compound low scoring compound penalty Task
#107 opened Nov 28, 2022 by dnil
2
Compound is missed if one parent is genotyped for each variant bug
#99 opened Jan 18, 2021 by bartcharbon
@dnil @jemten
5
ANN standard format enhancement
#96 opened Aug 13, 2020 by dridk
Implement a tier based ranking for somatic mutations enhancement
#95 opened May 27, 2020 by hassanfa
3
genmod score, data_type=string appears to match when the rule is a substring of the string in the VCF bug
#87 opened Jun 11, 2018 by bjhall
@jemten
1
"record_rule = max" appears to prioritize based on max(value) rather than max(score) Task
#86 opened Jun 11, 2018 by bjhall
2
CSQ field is not parsed properly in genmod score when using --skip_plugin_check Task
#85 opened May 21, 2018 by hassanfa
2
Modify rank model for reduced penetrance genes Under discussion
#69 opened Dec 2, 2016 by henrikstranneheim
1
Add support for IMPRECISE variants when querying a ref vcf enhancement
#61 opened May 12, 2016 by henrikstranneheim
Add support for MT inheritance models enhancement
#44 opened Oct 19, 2015 by henrikstranneheim
3
ProTip! Follow long discussions with comments:>50.