Update README.md

README.md

@@ -1,16 +1,12 @@
-### clusterbuster
-Analysis of clustered proteome data of many species 
+### kinFin
+Taxon-aware analysis of clustered proteomes
 
 ----------
 
 #### Analyse clusters
 ```
-src/kinfin.py data/nematoda/SpeciesIDs.txt \
-              data/nematoda/SpeciesClassification.txt \
-              data/nematoda/OrthologousGroups_I1.5.txt \
-              data/nematoda/OrthologousGroups_I2.0.txt
-```
-#### Hierarchality between clusters at two inflation values (I1.5 and I2.0): i.e. "Jaccard-magic"
-```
-src/calculate_jaccard_distances.py cluster_stats.txt I1.5 I2.0
+src/kinfin.py -s data/SpeciesIDs.txt \
+              -g data/OrthologousGroups_I3.5.txt \
+              -c data/SpeciesClassification.txt \
+              --nodesdb resources/nodesDB.txt
 ```