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session_info.txt
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R version 4.0.3 (2020-10-10)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 19041)
Matrix products: default
locale:
[1] LC_COLLATE=English_Ireland.1252 LC_CTYPE=English_Ireland.1252 LC_MONETARY=English_Ireland.1252 LC_NUMERIC=C
[5] LC_TIME=English_Ireland.1252
attached base packages:
[1] grid parallel stats4 stats graphics grDevices utils datasets methods base
other attached packages:
[1] UpSetR_1.4.0 org.Hs.eg.db_3.12.0 org.Bt.eg.db_3.12.0 OrganismDbi_1.32.0 GenomicFeatures_1.42.1
[6] AnnotationDbi_1.52.0 gProfileR_0.7.0 forcats_0.5.0 stringr_1.4.0 dplyr_1.0.2
[11] purrr_0.3.4 readr_1.4.0 tidyr_1.1.2 tibble_3.0.4 tidyverse_1.3.0
[16] gridExtra_2.3 VennDiagram_1.6.20 futile.logger_1.4.3 RColorBrewer_1.1-2 pheatmap_1.0.12
[21] ggpubr_0.4.0 ggplot2_3.3.2 DESeq2_1.30.0 SummarizedExperiment_1.20.0 Biobase_2.50.0
[26] MatrixGenerics_1.2.0 matrixStats_0.57.0 GenomicRanges_1.42.0 GenomeInfoDb_1.26.0 IRanges_2.24.0
[31] S4Vectors_0.28.0 BiocGenerics_0.36.0 rrcov_1.5-5 robustbase_0.93-6 biomaRt_2.46.0
loaded via a namespace (and not attached):
[1] readxl_1.3.1 backports_1.2.0 BiocFileCache_1.14.0 plyr_1.8.6 splines_4.0.3 BiocParallel_1.24.1
[7] digest_0.6.27 fansi_0.4.1 magrittr_1.5 memoise_1.1.0 openxlsx_4.2.3 Biostrings_2.58.0
[13] annotate_1.68.0 modelr_0.1.8 askpass_1.1 prettyunits_1.1.1 colorspace_1.4-1 blob_1.2.1
[19] rvest_0.3.6 rappdirs_0.3.1 ggrepel_0.8.2 haven_2.3.1 xfun_0.19 crayon_1.3.4
[25] RCurl_1.98-1.2 jsonlite_1.7.1 graph_1.68.0 genefilter_1.72.0 survival_3.2-7 glue_1.4.2
[31] gtable_0.3.0 zlibbioc_1.36.0 XVector_0.30.0 DelayedArray_0.16.0 car_3.0-10 DEoptimR_1.0-8
[37] abind_1.4-5 scales_1.1.1 futile.options_1.0.1 mvtnorm_1.1-1 DBI_1.1.0 rstatix_0.6.0
[43] Rcpp_1.0.5 xtable_1.8-4 progress_1.2.2 gridtext_0.1.1 foreign_0.8-80 bit_4.0.4
[49] httr_1.4.2 ellipsis_0.3.1 pkgconfig_2.0.3 XML_3.99-0.5 dbplyr_2.0.0 locfit_1.5-9.4
[55] tidyselect_1.1.0 rlang_0.4.8 munsell_0.5.0 cellranger_1.1.0 tools_4.0.3 cli_2.1.0
[61] generics_0.1.0 RSQLite_2.2.1 broom_0.7.2 bit64_4.0.5 fs_1.5.0 zip_2.1.1
[67] RBGL_1.66.0 formatR_1.7 xml2_1.3.2 compiler_4.0.3 rstudioapi_0.13 curl_4.3
[73] ggsignif_0.6.0 reprex_0.3.0 geneplotter_1.68.0 pcaPP_1.9-73 stringi_1.5.3 lattice_0.20-41
[79] Matrix_1.2-18 vctrs_0.3.4 pillar_1.4.6 lifecycle_0.2.0 BiocManager_1.30.10 data.table_1.13.2
[85] cowplot_1.1.0 bitops_1.0-6 rtracklayer_1.49.5 R6_2.5.0 rio_0.5.16 lambda.r_1.2.4
[91] assertthat_0.2.1 openssl_1.4.3 withr_2.3.0 GenomicAlignments_1.26.0 Rsamtools_2.6.0 GenomeInfoDbData_1.2.4
[97] hms_0.5.3 ggtext_0.1.0 carData_3.0-4 lubridate_1.7.9.2 tinytex_0.27