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release: v3.0.4 #614

Merged
merged 22 commits into from
Jun 20, 2024
Merged

release: v3.0.4 #614

merged 22 commits into from
Jun 20, 2024

Commits on Jun 17, 2024

  1. move dssp and msms out of the yml env file

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  2. move standard deps to project.toml

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  3. fix markov-clustering dep

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  4. add dev0 to markov clustering

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  5. fix numpy version

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  6. fix ruff error

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  7. add freesasa and biopython to pip deps

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  8. move libcifpp out of the env file

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  9. add quotation marks

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  10. move torch installation to pip

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  11. set torchvision and torchaudio versions

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  12. move torch back to conda

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  13. remove env file

    @gcroci2
    gcroci2 committed Jun 17, 2024
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  14. remove env yml from action.yml

    @gcroci2
    gcroci2 committed Jun 17, 2024
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Commits on Jun 18, 2024

  1. ci: simplify lint action 

    this action doesn't require the entire package to be built, merely ruff to be installed.
    @DaniBodor
    DaniBodor committed Jun 18, 2024
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Commits on Jun 20, 2024

  1. move the remaining conda deps to a yml file

    @gcroci2
    gcroci2 committed Jun 20, 2024
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  2. readd the path to the env file

    @gcroci2
    gcroci2 committed Jun 20, 2024
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  3. ci: fix return exit code

    @DaniBodor
    DaniBodor committed Jun 20, 2024
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  4. Merge pull request #612 from DeepRank/simplify_lint_action_dbodor 

    ci: simplify lint action
    @DaniBodor
    DaniBodor committed Jun 20, 2024
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  5. add pip installation to the docker file

    @gcroci2
    gcroci2 committed Jun 20, 2024
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  6. Merge pull request #611 from DeepRank/remove_conda_deps 

    CI: restore PyPI installation
    @gcroci2
    gcroci2 committed Jun 20, 2024
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  7. bump2version 3.0.4

    @gcroci2
    gcroci2 committed Jun 20, 2024
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