compound-library, crystal-library and soaking-service

Adds compound library service that keeps track of all the compounds.
Adds crystal library service that keeps track of all the crystals.
Adds compound soaking service that tracks soaked compounds

What's Changed

• created backend folder. moved backend stuff to folder by @kaimsfd in #110
• Add .vscode to gitignore by @kaimsfd in #123
• Bump library/rust from 1.72.0-bullseye to 1.72.1-bullseye in /.devcontainer by @dependabot in #115
• Bump actions/checkout from 4.0.0 to 4.1.0 by @dependabot in #116
• Bump tungstenite from 0.20.0 to 0.20.1 in /backend by @dependabot in #121
• Fix pre-commit hooks by @garryod in #125
• Store ONNX files in Git LFS by @garryod in #126
• Remove .env file mount from OPA dev container by @garryod in #128
• Use templating for pin-packing opa url by @garryod in #127
• Bump chart application versions to 0.0.5 by @garryod in #129
• Add devcontainer smoke test to CI by @garryod in #130
• [clap_for_s3] Make force path style a Clap action by @garryod in #131
• [targeting] Add option to skip creation of S3 bucket by @garryod in #132
• Pass chimp chomp RabbitMQ URL in as env var by @garryod in #133
• [chimp_protocol] Return predictions as integers by @garryod in #134
• Add a deployment chart for the targeting service by @garryod in #137
• [chimp_chomp] Download images from URL by @garryod in #135
• [graphql_endpoints] Forward authoriztion token in GraphQLSubscription by @garryod in #136
• Consistently name plate & well in across API by @garryod in #138
• Bump actions/checkout from 4.0.0 to 4.1.0 by @dependabot in #140
• Bump webpki from 0.22.1 to 0.22.2 in /backend by @dependabot in #141
• create frontend template by @kaimsfd in #124
• Bump library/rust from 1.72.1-bullseye to 1.73.0-bullseye in /.devcontainer by @dependabot in #148
• Bump rustix from 0.37.23 to 0.37.25 in /backend by @dependabot in #149
• Bump @babel/traverse from 7.23.0 to 7.23.2 in /frontend by @dependabot in #150
• changed backend dependabot dir to /backend/ by @kaimsfd in #153
• added frontend dependabot updates by @kaimsfd in #152
• Bump actions/checkout from 4.1.0 to 4.1.1 by @dependabot in #154
• Bump clap from 4.4.4 to 4.4.6 in /backend by @dependabot in #156
• Bump tracing from 0.1.37 to 0.1.40 in /backend by @dependabot in #161
• Bump ort from 1.15.2 to 1.16.2 in /backend by @dependabot in #163
• Bump reqwest from 0.11.20 to 0.11.22 in /backend by @dependabot in #160
• Bump opencv from 0.84.5 to 0.85.3 in /backend by @dependabot in #155
• Bump tokio from 1.32.0 to 1.33.0 in /backend by @dependabot in #158
• Bump uuid from 1.4.1 to 1.5.0 in /backend by @dependabot in #159
• Bump itertools from 0.10.5 to 0.11.0 in /backend by @dependabot in #162
• Bump @babel/core from 7.23.0 to 7.23.2 in /frontend by @dependabot in #188
• Bump resolve-url-loader from 4.0.0 to 5.0.0 in /frontend by @dependabot in #186
• Bump @testing-library/react from 13.4.0 to 14.0.0 in /frontend by @dependabot in #184
• Bump web-vitals from 2.1.4 to 3.5.0 in /frontend by @dependabot in #182
• Bump webpack-manifest-plugin from 4.1.1 to 5.0.0 in /frontend by @dependabot in #181
• Bump dotenv from 10.0.0 to 16.3.1 in /frontend by @dependabot in #179
• Bump @testing-library/user-event from 13.5.0 to 14.5.1 in /frontend by @dependabot in #177
• Bump jest-resolve from 27.5.1 to 29.7.0 in /frontend by @dependabot in #176
• Bump camelcase from 6.3.0 to 8.0.0 in /frontend by @dependabot in #175
• Bump eslint from 8.49.0 to 8.51.0 in /frontend by @dependabot in #174
• Bump bfj from 7.1.0 to 8.0.0 in /frontend by @dependabot in #168
• Bump dotenv-expand from 5.1.0 to 10.0.0 in /frontend by @dependabot in #180
• Bump resolve from 1.22.6 to 1.22.8 in /frontend by @dependabot in #178
• Bump @testing-library/jest-dom from 5.17.0 to 6.1.4 in /frontend by @dependabot in #173
• Bump thiserror from 1.0.48 to 1.0.50 in /backend by @dependabot in #191
• Bump css-minimizer-webpack-plugin from 3.4.1 to 5.0.1 in /frontend by @dependabot in #189
• Bump workbox-webpack-plugin from 6.6.1 to 7.0.0 in /frontend by @dependabot in #187
• Bump fs-extra from 10.1.0 to 11.1.1 in /frontend by @dependabot in #185
• Bump babel-loader from 8.3.0 to 9.1.3 in /frontend by @dependabot in #169
• Bump @svgr/webpack from 5.5.0 to 8.1.0 in /frontend by @dependabot in #183
• Bump jest-watch-typeahead from 1.1.0 to 2.2.2 in /frontend by @dependabot in #172
• Bump serde from 1.0.188 to 1.0.189 in /backend by @dependabot in #164
• Bump react-refresh from 0.11.0 to 0.14.0 in /frontend by @dependabot in #170
• Bump webpack from 5.88.2 to 5.89.0 in /frontend by @dependabot in #167
• Bump source-map-loader from 3.0.2 to 4.0.1 in /frontend by @dependabot in #166
• Bump babel-jest from 27.5.1 to 29.7.0 in /frontend by @dependabot in #171
• changed root docker dependabot check to /backend/ by @kaimsfd in #190
• Bump eslint from 8.51.0 to 8.52.0 in /frontend by @dependabot in #193
• Bump Swatinem/rust-cache from 2.7.0 to 2.7.1 by @dependabot in #194
• Bump library/rust from 1.72.0-bullseye to 1.73.0-bullseye in /backend by @dependabot in #192
• Bump actions/setup-node from 3.8.1 to 4.0.0 by @dependabot in #195
• Bump awalsh128/cache-apt-pkgs-action from 1.3.0 to 1.3.1 by @dependabot in #197
• Bump serde_json from 1.0.107 to 1.0.108 in /backend by @dependabot in #198
• Bump futures-core from 0.3.28 to 0.3.29 in /backend by @dependabot in #199
• Bump serde from 1.0.189 to 1.0.190 in /backend by @dependabot in #200
• Bump futures from 0.3.28 to 0.3.29 in /backend by @dependabot in #204
• Bump opencv from 0.85.3 to 0.86.0 in /backend by @dependabot in #201
• Bump helm/chart-testing-action from 2.4.0 to 2.6.0 by @dependabot in #206
• Bump clap from 4.4.6 to 4.4.7 in /backend by @dependabot in #202
• Bump chrono-tz from 0.8.3 to 0.8.4 in /backend by @dependabot in #203
• Bump opencv from 0.86.0 to 0.86.1 in /backend by @dependabot in #208
• Bump helm/chart-testing-action from 2.6.0 to 2.6.1 by @dependabot in #210
• [pin_packing] Paginate query responses by @garryod in #146
• Bump devcontainers/ci from 0.3.1900000329 to 0.3.1900000338 by @dependabot in #214
• Bump tracing-subscriber from 0.3.17 to 0.3.18 in /backend by @dependabot in #215
• Bump serde from 1.0.190 to 1.0.192 in /backend by @dependabot in #216
• Bump clap from 4.4.7 to 4.4.8 in /backend by @dependabot in #217
• Bump tokio from 1.33.0 to 1.34.0 in /backend by @dependabot in #218
• Bump ort from 1.16.2 to 1.16.3 in /backend by @dependabot in #219
• Bump @babel/core from 7.23.2 to 7.23.3 in /frontend by @dependabot in #213
• Bump @testing-library/react from 14.0.0 to 14.1.0 in /frontend by @dependabot in #212
• Bump eslint from 8.52.0 to 8.53.0 in /frontend by @dependabot in #209
• [the_paginator] Add SQL string tests by @garryod in #220
• [graphql_types] Remove graphql_types crate by @garryod in #221
• [chimp_controller] Add the chimp controller service by @garryod in #139
• Bump async-graphql-axum from 5.0.10 to 6.0.9 in /backend by @dependabot in #205
• Bump prettier from 3.0.3 to 3.1.0 in /frontend by @dependabot in #211
• [targeting] Move S3 CLI parsing to targeting crate by @garryod in #142
• Bump async-graphql from 6.0.10 to 6.0.11 in /backend by @dependabot in #226
• Bump cynic from 3.2.2 to 3.3.0 in /backend by @dependabot in #224
• Bump uuid from 1.5.0 to 1.6.1 in /backend by @dependabot in #228
• Bump library/rust from 1.73.0-bullseye to 1.74.0-bullseye in /.devcontainer by @dependabot in #234
• Bump library/rust from 1.73.0-bullseye to 1.74.0-bullseye in /backend by @dependabot in #235
• Bump docker/build-push-action from 5.0.0 to 5.1.0 by @dependabot in #233
• Bump @testing-library/react from 14.1.0 to 14.1.2 in /frontend by @dependabot in #230
• Bump eslint from 8.53.0 to 8.54.0 in /frontend by @dependabot in #232
• Bump typescript from 5.2.2 to 5.3.2 in /frontend by @dependabot in #231
• frontend docker config by @kaimsfd in #223
• Bump clap from 4.4.8 to 4.4.9 in /backend by @dependabot in #236
• Bump opencv from 0.86.1 to 0.88.1 in /backend by @dependabot in #237
• Bump serde from 1.0.192 to 1.0.193 in /backend by @dependabot in #240
• Bump async-graphql-axum from 6.0.10 to 6.0.11 in /backend by @dependabot in #238
• Bump url from 2.4.1 to 2.5.0 in /backend by @dependabot in #239
• Bump openssl from 0.10.57 to 0.10.60 in /backend by @dependabot in #242
• Bump clap from 4.4.9 to 4.4.10 in /backend by @dependabot in #243
• integrate Apollo Client by @kaimsfd in #145
• Bump library/node from 20.6.0-bookworm to 21.3.0-bookworm in /.devcontainer by @dependabot in #256
• Bump browserslist from 4.22.1 to 4.22.2 in /frontend by @dependabot in #251
• Bump @apollo/client from 3.5.4 to 3.8.8 in /frontend by @dependabot in #250
• Bump @babel/core from 7.23.3 to 7.23.5 in /frontend by @dependabot in #249
• Bump fs-extra from 11.1.1 to 11.2.0 in /frontend by @dependabot in #248
• Bump eslint from 8.54.0 to 8.55.0 in /frontend by @dependabot in #247
• Bump framer-motion from 10.16.5 to 10.16.12 in /frontend by @dependabot in #246
• Bump @adobe/css-tools from 4.3.1 to 4.3.2 in /frontend by @dependabot in #244
• Bump actions/deploy-pages from 2.0.4 to 3.0.0 by @dependabot in #253
• Bump docker/metadata-action from 5.0.0 to 5.3.0 by @dependabot in #254
• Bump actions/configure-pages from 3 to 4 by @dependabot in #255
• Bump clap from 4.4.10 to 4.4.11 in /backend by @dependabot in #245
• Bump library/rust from 1.74.0-bullseye to 1.74.1-bullseye in /.devcontainer by @dependabot in #257
• Bump opencv from 0.88.1 to 0.88.2 in /backend by @dependabot in #268
• Bump tokio from 1.34.0 to 1.35.0 in /backend by @dependabot in #269
• Bump once_cell from 1.18.0 to 1.19.0 in /backend by @dependabot in #270
• Bump library/rust from 1.74.0-bullseye to 1.74.1-bullseye in /backend by @dependabot in #266
• Bump actions/deploy-pages from 3.0.0 to 3.0.1 by @dependabot in #265
• Bump docker/metadata-action from 5.3.0 to 5.4.0 by @dependabot in #274
• Bump actions/setup-node from 4.0.0 to 4.0.1 by @dependabot in #275
• Bump devcontainers/ci from 0.3.1900000338 to 0.3.1900000339 by @dependabot in #273
• Bump opencv from 0.88.2 to 0.88.4 in /backend by @dependabot in #271
• Bump thiserror from 1.0.50 to 1.0.51 in /backend by @dependabot in #272
• Bump actions/upload-artifact from 3.1.3 to 4.0.0 by @dependabot in #276
• Bump actions/upload-pages-artifact from 2.0.0 to 3.0.0 by @dependabot in #282
• Bump actions/deploy-pages from 3.0.1 to 4.0.2 by @dependabot in #283
• Bump library/rust from 1.74.1-bullseye to 1.75.0-bullseye in /backend by @dependabot in #304
• Bump library/rust from 1.74.1-bullseye to 1.75.0-bullseye in /.devcontainer by @dependabot in #305
• Bump futures-core from 0.3.29 to 0.3.30 in /backend by @dependabot in #285
• Bump futures-util from 0.3.29 to 0.3.30 in /backend by @dependabot in #286
• Bump serde_json from 1.0.108 to 1.0.109 in /backend by @dependabot in #297
• Bump async-trait from 0.1.74 to 0.1.76 in /backend by @dependabot in #298
• Bump thiserror from 1.0.51 to 1.0.53 in /backend by @dependabot in #303
• Bump tokio from 1.35.0 to 1.35.1 in /backend by @dependabot in #281
• Bump reqwest from 0.11.22 to 0.11.23 in /backend by @dependabot in #280
• Bump futures from 0.3.29 to 0.3.30 in /backend by @dependabot in #287
• Bump clap from 4.4.11 to 4.4.12 in /backend by @dependabot in #299
• Bump thiserror from 1.0.53 to 1.0.56 in /backend by @dependabot in #306
• Bump the minor group in /.devcontainer with 1 update by @dependabot in #308
• Bump the minor group in /frontend with 13 updates by @dependabot in #309
• Bump the patch group in /backend with 6 updates by @dependabot in #311
• Bump the patch group in /backend with 4 updates by @dependabot in #313
• Bump the minor group in /frontend with 3 updates by @dependabot in #312
• Bump the minor group with 1 update by @dependabot in #317
• Bump follow-redirects from 1.15.3 to 1.15.4 in /frontend by @dependabot in #318
• Bump cynic-codegen from 3.3.1 to 3.3.3 in /backend by @dependabot in #319
• Bump the minor group in /frontend with 6 updates by @dependabot in #326
• Bump the patch group in /backend with 2 updates by @dependabot in #323
• Bump the github-artifacts group with 1 update by @dependabot in #321
• Bump the minor group with 2 updates by @dependabot in #322
• Bump cynic from 3.3.1 to 3.3.3 in /backend by @dependabot in #324
• Bump cynic-codegen from 3.3.3 to 3.4.0 in /backend by @dependabot in #325
• Bump source-map-loader from 4.0.2 to 5.0.0 in /frontend by @dependabot in #327
• Bump h2 from 0.3.21 to 0.3.24 in /backend by @dependabot in #328
• Bump cynic from 3.3.3 to 3.4.0 in /backend by @dependabot in #335
• Bump uuid from 1.6.1 to 1.7.0 in /backend by @dependabot in #336
• Bump shlex from 1.2.0 to 1.3.0 in /backend by @dependabot in #337
• Uuidv7 update by @iamvigneshwars in #356
• Fix cargo doc build by updating dependencies using nightly std::simd by @garryod in #358
• Bump borales/actions-yarn from 4 to 5 by @dependabot in #345
• Bump css-minimizer-webpack-plugin from 5.0.1 to 6.0.0 in /frontend by @dependabot in #331
• Bump the minor group in /.devcontainer with 2 updates by @dependabot in #346
• Bump the patch group in /backend with 9 updates by @dependabot in #352
• Bump the github-artifacts group with 1 update by @dependabot in #359
• Bump the minor group in /backend with 1 update by @dependabot in #350
• Bump the minor group in /frontend with 14 updates by @dependabot in #361
• Bump the minor group with 4 updates by @dependabot in #360
• Compound library - types, instances and pagination by @iamvigneshwars in #355
• Bump the minor group in /.devcontainer with 1 update by @dependabot in #366
• Bump the minor group in /frontend with 2 updates by @dependabot in #368
• Bump dotenv-expand from 10.0.0 to 11.0.6 in /frontend by @dependabot in #369
• Bump the github-artifacts group with 1 update by @dependabot in #367
• Bump itertools from 0.11.0 to 0.12.1 in /backend by @dependabot in #365
• Bump webpack-dev-server from 4.15.1 to 5.0.2 in /frontend by @dependabot in #370
• Add compound library helm chart by @garryod in #363
• Bump the patch group in /backend with 3 updates by @dependabot in #372
• Bump the minor group in /frontend with 3 updates by @dependabot in #373
• Crystal library by @iamvigneshwars in #357
• Bump the minor group with 2 updates by @dependabot in #377
• Bump the minor group in /frontend with 3 updates by @dependabot in #376
• Federated compound soaking service by @iamvigneshwars in #375
• Bump mio from 0.8.10 to 0.8.11 in /backend by @dependabot in #378

New Contributors

• @kaimsfd made their first contribution in #110
• @iamvigneshwars made their first contribution in #356

Full Changelog: 0.0.5...0.0.6