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Add frontier as a supported machine #124
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# Options related to deploying an e3sm-unified conda environment on supported | ||
# machines | ||
[e3sm_unified] | ||
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# the unix group for permissions for the e3sm-unified conda environment | ||
group = cli115 | ||
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# the compiler set to use for system libraries and MPAS builds | ||
compiler = gnu | ||
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# the system MPI library to use for intel18 compiler | ||
mpi = mpich | ||
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# the path to the directory where activation scripts, the base environment, and | ||
# system libraries will be deployed | ||
base_path = /lustre/orion/cli115/world-shared/software/e3sm-unified | ||
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# whether to use system modules for hdf5, netcdf-c, netcdf-fortran and pnetcdf | ||
# (spack modules are used otherwise) | ||
use_system_hdf5_netcdf = True | ||
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# config options related to data needed by diagnostics software such as | ||
# e3sm_diags and MPAS-Analysis | ||
[diagnostics] | ||
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# The base path to the diagnostics directory | ||
base_path = /lustre/orion/cli115/world-shared/diagnostics | ||
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# the unix group for permissions for diagnostics | ||
group = cli115 | ||
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# The parallel section describes options related to running jobs in parallel | ||
[parallel] | ||
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# parallel system of execution: slurm, cobalt or single_node | ||
system = slurm | ||
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# whether to use mpirun or srun to run a task | ||
parallel_executable = srun | ||
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# cores per node on the machine | ||
cores_per_node = 56 | ||
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# account for running diagnostics jobs | ||
account = cli115 | ||
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# available partition(s) (default is the first) | ||
partitions = batch | ||
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# Config options related to spack environments | ||
[spack] | ||
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# whether to load modules from the spack yaml file before loading the spack | ||
# environment | ||
modules_before = False | ||
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# whether to load modules from the spack yaml file after loading the spack | ||
# environment | ||
modules_after = False | ||
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# whether the machine uses cray compilers | ||
cray_compilers = True | ||
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# config options related to synchronizing files | ||
[sync] | ||
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# the full hostname of the machine | ||
hostname = frontier.olcf.ornl.gov |
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module reset >& /dev/null | ||
module switch PrgEnv-cray PrgEnv-gnu/8.3.3 >& /dev/null | ||
module switch gcc gcc/11.2.0 >& /dev/null | ||
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{% if e3sm_lapack %} | ||
module load cray-libsci/22.12.1.1 | ||
{% endif %} | ||
{% if e3sm_hdf5_netcdf %} | ||
module load cray-hdf5-parallel/1.12.2.1 | ||
module load cray-netcdf-hdf5parallel/4.9.0.1 | ||
module load cray-parallel-netcdf/1.12.3.1 | ||
{% endif %} | ||
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{% if e3sm_hdf5_netcdf %} | ||
setenv NETCDF_C_PATH $CRAY_NETCDF_HDF5PARALLEL_PREFIX | ||
setenv NETCDF_FORTRAN_PATH $CRAY_NETCDF_HDF5PARALLEL_PREFIX | ||
setenv PNETCDF_PATH $CRAY_PARALLEL_NETCDF_PREFIX | ||
{% endif %} | ||
setenv HDF5_USE_FILE_LOCKING FALSE |
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module reset >& /dev/null | ||
module switch PrgEnv-cray PrgEnv-gnu/8.3.3 >& /dev/null | ||
module switch gcc gcc/11.2.0 >& /dev/null | ||
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{% if e3sm_lapack %} | ||
module load cray-libsci/22.12.1.1 | ||
{% endif %} | ||
{% if e3sm_hdf5_netcdf %} | ||
module load cray-hdf5-parallel/1.12.2.1 | ||
module load cray-netcdf-hdf5parallel/4.9.0.1 | ||
module load cray-parallel-netcdf/1.12.3.1 | ||
{% endif %} | ||
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{% if e3sm_hdf5_netcdf %} | ||
export NETCDF_C_PATH=$CRAY_NETCDF_HDF5PARALLEL_PREFIX | ||
export NETCDF_FORTRAN_PATH=$CRAY_NETCDF_HDF5PARALLEL_PREFIX | ||
export PNETCDF_PATH=$CRAY_PARALLEL_NETCDF_PREFIX | ||
{% endif %} | ||
export HDF5_USE_FILE_LOCKING=FALSE |
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spack: | ||
specs: | ||
- gcc | ||
- cray-mpich | ||
{% if e3sm_lapack %} | ||
- cray-libsci | ||
{% endif %} | ||
{% if e3sm_hdf5_netcdf %} | ||
- hdf5 | ||
- netcdf-c | ||
- netcdf-fortran | ||
- parallel-netcdf | ||
{% endif %} | ||
{{ specs }} | ||
concretizer: | ||
unify: when_possible | ||
packages: | ||
all: | ||
compiler: [[email protected]] | ||
providers: | ||
mpi: [[email protected]] | ||
{% if e3sm_lapack %} | ||
lapack: [[email protected]] | ||
{% endif %} | ||
bzip2: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
curl: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
gettext: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
libxml2: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
ncurses: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
openssl: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
perl: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
python: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /opt/cray/pe/python/3.9.13.1 | ||
modules: | ||
- cray-python/3.9.13.1 | ||
buildable: false | ||
tar: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
xz: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /usr | ||
buildable: false | ||
gcc: | ||
externals: | ||
- spec: [email protected] | ||
modules: | ||
- PrgEnv-gnu/8.3.3 | ||
- gcc/11.2.0 | ||
- craype/2.7.19 | ||
- libfabric/1.15.2.0 | ||
buildable: false | ||
cray-mpich: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /opt/cray/pe/mpich/8.1.23/ofi/gnu/9.1 | ||
modules: | ||
- libfabric/1.15.2.0 | ||
- cray-mpich/8.1.23 | ||
buildable: false | ||
libfabric: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /opt/cray/libfabric/1.15.2.0 | ||
modules: | ||
- libfabric/1.15.2.0 | ||
buildable: false | ||
{% if e3sm_lapack %} | ||
cray-libsci: | ||
externals: | ||
- spec: [email protected] | ||
prefix: /opt/cray/pe/libsci/22.12.1.1/GNU/9.1/x86_64 | ||
modules: | ||
- cray-libsci/22.12.1.1 | ||
buildable: false | ||
{% endif %} | ||
{% if e3sm_hdf5_netcdf %} | ||
hdf5: | ||
externals: | ||
- spec: [email protected]~cxx+fortran+hl~java+mpi+shared | ||
prefix: /opt/cray/pe/hdf5-parallel/1.12.2.1/GNU/9.1 | ||
buildable: false | ||
parallel-netcdf: | ||
externals: | ||
- spec: [email protected]+cxx+fortran+pic+shared | ||
prefix: /opt/cray/pe/parallel-netcdf/1.12.3.1/GNU/9.1/ | ||
buildable: false | ||
netcdf-c: | ||
externals: | ||
- spec: [email protected]+mpi~parallel-netcdf | ||
prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.1/GNU/9.1 | ||
buildable: false | ||
netcdf-fortran: | ||
externals: | ||
- spec: [email protected] ^netcdf-c+mpi | ||
prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.1/GNU/9.1 | ||
- spec: [email protected] ^netcdf-c~mpi | ||
prefix: /opt/cray/pe/netcdf/4.9.0.1/GNU/9.1 | ||
buildable: false | ||
{% endif %} | ||
{% if system_hdf5_netcdf %} | ||
hdf5: | ||
externals: | ||
- spec: [email protected]~cxx+fortran+hl~java+mpi+shared | ||
prefix: /opt/cray/pe/hdf5-parallel/1.12.2.1/GNU/9.1 | ||
- spec: [email protected]~cxx+fortran+hl~java~mpi+shared | ||
prefix: /opt/cray/pe/hdf5/1.12.2.1/GNU/9.1 | ||
buildable: false | ||
parallel-netcdf: | ||
externals: | ||
- spec: [email protected]+cxx+fortran+pic+shared | ||
prefix: /opt/cray/pe/parallel-netcdf/1.12.3.1/GNU/9.1/ | ||
buildable: false | ||
netcdf-c: | ||
externals: | ||
- spec: [email protected]+mpi~parallel-netcdf | ||
prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.1/GNU/9.1 | ||
- spec: [email protected]~mpi~parallel-netcdf | ||
prefix: /opt/cray/pe/netcdf/4.9.0.1/GNU/9.1 | ||
buildable: false | ||
netcdf-fortran: | ||
externals: | ||
- spec: [email protected] ^netcdf-c+mpi | ||
prefix: /opt/cray/pe/netcdf-hdf5parallel/4.9.0.1/GNU/9.1 | ||
- spec: [email protected] ^netcdf-c~mpi | ||
prefix: /opt/cray/pe/netcdf/4.9.0.1/GNU/9.1 | ||
buildable: false | ||
{% endif %} | ||
config: | ||
install_missing_compilers: false | ||
compilers: | ||
- compiler: | ||
spec: [email protected] | ||
paths: | ||
cc: cc | ||
cxx: CC | ||
f77: ftn | ||
fc: ftn | ||
flags: {} | ||
operating_system: sles15 | ||
target: x86_64 | ||
modules: | ||
- PrgEnv-gnu/8.3.3 | ||
- gcc/11.2.0 | ||
- craype/2.7.19 | ||
- libfabric/1.15.2.0 | ||
environment: | ||
prepend_path: | ||
PKG_CONFIG_PATH: "/opt/cray/xpmem/2.5.2-2.4_3.45__gd0f7936.shasta/lib64/pkgconfig" |
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Not ideal but this is what I could figure out.