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Added RNA assay term for #2219 #2267

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merged 1 commit into from
Aug 8, 2024
Merged

Added RNA assay term for #2219 #2267

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11 changes: 11 additions & 0 deletions src/ontology/efo-edit.owl
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Original file line number Diff line number Diff line change
Expand Up @@ -17222,6 +17222,7 @@ Declaration(Class(efo:EFO_0022835))
Declaration(Class(efo:EFO_0022836))
Declaration(Class(efo:EFO_0022837))
Declaration(Class(efo:EFO_0022838))
Declaration(Class(efo:EFO_0022839))
Declaration(Class(efo:EFO_0030000))
Declaration(Class(efo:EFO_0030001))
Declaration(Class(efo:EFO_0030002))
Expand Down Expand Up @@ -207538,6 +207539,16 @@ AnnotationAssertion(oboInOwl:hasExactSynonym efo:EFO_0022838 "Human Umbilical co
AnnotationAssertion(rdfs:label efo:EFO_0022838 "HUDEP-2"@en)
SubClassOf(efo:EFO_0022838 efo:EFO_0005740)

# Class: efo:EFO_0022839 (STORM-seq)

AnnotationAssertion(Annotation(efo:definition_citation "https://doi.org/10.1101/2022.03.14.484332") obo:IAO_0000115 efo:EFO_0022839 "Single-cell TOtal RNA Miniaturized sequencing. A full-length single-cell ribo-reduced RNA sequencing protocol, optimized to profile thousands of cells per run. STORM-seq is built upon the Takara SMART-seq Stranded kit, allowing use of off-the-shelf reagents and standard equipment.")
AnnotationAssertion(obo:IAO_0000117 efo:EFO_0022839 "https://orcid.org/0000-0003-1653-8449")
AnnotationAssertion(dc:creator efo:EFO_0022839 "Zoe May Pendlington")
AnnotationAssertion(dc:date efo:EFO_0022839 "2024-08-08T08:50:51Z"^^xsd:dateTime)
AnnotationAssertion(rdfs:label efo:EFO_0022839 "STORM-seq"@en)
SubClassOf(efo:EFO_0022839 efo:EFO_0001457)
SubClassOf(efo:EFO_0022839 efo:EFO_0010184)

# Class: efo:EFO_0030000 (STARmap)

AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:29930089") Annotation(oboInOwl:hasDbXref "https://orcid.org/0000-0002-3090-9894") obo:IAO_0000115 efo:EFO_0030000 "STARmap is an image-based technology for 3D intact-tissue RNA sequencing, which integrates hydrogel-tissue chemistry, targeted signal amplification, and in situ sequencing.")
Expand Down