2024-09-16 EFO 3.70.0

EFO 3.70.0 includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 808
Number of classes added: 2337
Number of classes deleted: 1

There are also two new release versions of the Open Targets profile and slim as JSON files.

2024-08-15 EFO 3.69.0

EFO 3.69.0 includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 33
Number of classes added: 106
Number of classes deleted: 0

2024-07-15 EFO 3.68.0

EFO 3.68.0 includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 404
Number of classes added: 3
Number of classes deleted: 2

2024-07-4 EFO 3.67.1 Patch Release

EFO 3.67.1 is a patch release to fix bugs with duplicated imports occurring in 3.67.0.

Number of classes changed: 275
Number of classes added: 4
Number of classes deleted: 0

2024-06-17 EFO 3.67.0

EFO 3.67.0 includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 12936
Number of classes added: 343
Number of classes deleted: 2

2024-05-15 EFO 3.66.0

EFO 3.66.0 includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 125
Number of classes added: 40
Number of classes deleted: 3

2024-04-15 EFO 3.65.0

EFO - Release Notes

Experimental Factor Ontology version 3.65.0
Date Released: 15th April 2024
Class Count: 54935

Summary:

EFO 3.65.0 release includes the first phase in replacing response to and measurement terms with OBA trait terms for the GWAS Catalog. This release also includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 4041
Number of classes added: 2441
Number of classes deleted: 3

What's Changed

• Added term for #2168 by @zoependlington in #2197
• Pre-release fixes by @zoependlington in #2199
• Imported OBA term by @ar-ibrahim in #2200
• EFO release 3.65.0 by @ar-ibrahim in #2201

Full Changelog: v3.64.0...v3.65.0

2024-03-18 EFO 3.64.0

EFO 3.64.0 release includes the first phase in replacing response to and measurement terms with OBA trait terms for the GWAS Catalog. This release also includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 431
Number of classes added: 88
Number of classes deleted: 0

2024-02-15 EFO 3.63.0

EFO 3.63.0 release includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 115
Number of classes added: 475
Number of classes deleted: 1

What's Changed

• Added new metabolite terms by @ar-ibrahim in #2171
• Added metabolite terms (2) by @ar-ibrahim in #2172
• Obsoleted EFO term_diverticulitis by @ar-ibrahim in #2175
• Added seropositivity terms by @ar-ibrahim in #2177
• Remove leading spaces from synonyms by @bgyori in #2170
• EVA January 2024 import and updates after Mondo and HANCESTRO release… by @zoependlington in #2179
• Updated label, synonym and definition for #2169 by @zoependlington in #2181
• Added cell line terms for #2084 by @zoependlington in #2182
• EFO release 3.63.0 by @ar-ibrahim in #2183

Full Changelog: v3.62.0...v3.63.0

2024-01-15 EFO 3.62.0

EFO 3.62.0 release includes further alignments between EFO and MONDO as well as terms required for Open Targets projects, HCA, Array Express/Expression Atlas and the GWAS Catalog.

Number of classes changed: 62
Number of classes added: 139
Number of classes deleted: 1