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{2023.06}[gompi/2022b] BLAST+ V2.14.0 #1804

{2023.06}[gompi/2022b] BLAST+ V2.14.0

{2023.06}[gompi/2022b] BLAST+ V2.14.0 #1804

# documentation: https://help.github.com/en/articles/workflow-syntax-for-github-actions
name: Tests for eessi_archdetect.sh
on:
push:
branches: [ "*-software.eessi.io" ]
pull_request:
permissions:
contents: read # to fetch code (actions/checkout)
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
proc_cpuinfo:
- x86_64/intel/haswell/archspec-linux-E5-2680-v3
- x86_64/intel/skylake_avx512/archspec-linux-6132
- x86_64/amd/zen2/Azure-CentOS7-7V12
- x86_64/amd/zen3/Azure-CentOS7-7V73X
- x86_64/amd/zen4/Azure-Alma8-9V33X
- x86_64/amd/zen4/Shinx-RHEL8-9654
- aarch64/neoverse_n1/Azure-Ubuntu20-Altra
- aarch64/neoverse_n1/AWS-awslinux-graviton2
- aarch64/neoverse_v1/AWS-awslinux-graviton3
# commented out since these targets are currently not supported in software.eessi.io repo
# (and some tests assume that the corresponding subdirectory in software layer is there)
# - ppc64le/power9le/unknown-power9le
fail-fast: false
steps:
- name: checkout
uses: actions/checkout@b4ffde65f46336ab88eb53be808477a3936bae11 # v4.1.1
- name: Mount EESSI CernVM-FS pilot repository
uses: cvmfs-contrib/github-action-cvmfs@55899ca74cf78ab874bdf47f5a804e47c198743c # v4.0
with:
cvmfs_config_package: https://github.com/EESSI/filesystem-layer/releases/download/latest/cvmfs-config-eessi_latest_all.deb
cvmfs_http_proxy: DIRECT
cvmfs_repositories: software.eessi.io
- name: test eessi_archdetect.sh
run: |
export EESSI_MACHINE_TYPE=${{matrix.proc_cpuinfo}}
export EESSI_MACHINE_TYPE=${EESSI_MACHINE_TYPE%%/*}
export EESSI_PROC_CPUINFO=./tests/archdetect/${{matrix.proc_cpuinfo}}.cpuinfo
# check that printing of best match works correctly
CPU_ARCH=$(./init/eessi_archdetect.sh cpupath)
if [[ $CPU_ARCH == "$( cat ./tests/archdetect/${{matrix.proc_cpuinfo}}.output )" ]]; then
echo "Test for ${{matrix.proc_cpuinfo}} PASSED: $CPU_ARCH"
else
echo "Test for ${{matrix.proc_cpuinfo}} FAILED: $CPU_ARCH" >&2
exit 1
fi
# check that $EESSI_SOFTWARE_SUBDIR_OVERRIDE is honored
export EESSI_SOFTWARE_SUBDIR_OVERRIDE='dummy/cpu'
CPU_ARCH=$(./init/eessi_archdetect.sh cpupath)
if [[ $CPU_ARCH == "${EESSI_SOFTWARE_SUBDIR_OVERRIDE}" ]]; then
echo "Test for picking up on \$EESSI_SOFTWARE_SUBDIR_OVERRIDE PASSED"
else
echo "Test for picking up on \$EESSI_SOFTWARE_SUBDIR_OVERRIDE FAILED" >&2
exit 1
fi
unset EESSI_SOFTWARE_SUBDIR_OVERRIDE
# check that printing of all matches works correctly (-a option for cpupath action)
CPU_ARCHES=$(./init/eessi_archdetect.sh -a cpupath)
if [[ $CPU_ARCHES == "$( cat ./tests/archdetect/${{matrix.proc_cpuinfo}}.all.output )" ]]; then
echo "Test for ${{matrix.proc_cpuinfo}} PASSED: $CPU_ARCHES"
else
echo "Test for ${{matrix.proc_cpuinfo}} FAILED: $CPU_ARCHES" >&2
exit 1
fi
# Check all those architectures actually exist (if this EESSI version has been populated already)
if [ -d ${EESSI_PREFIX}/software/linux ]; then
for dir in $(echo "$CPU_ARCHES" | tr ':' '\n'); do
# Search all EESSI versions as we may drop support at some point
ls -d ${EESSI_PREFIX}/software/linux/${dir}
done
fi