{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706

TopRichard · 2024-09-17T12:08:50Z

missing packages :

BamTools/2.5.2-GCC-12.2.0
BCFtools/1.17-GCC-12.2.0
Bio-DB-HTS/3.01-GCC-12.2.0
Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0
Bowtie2/2.5.1-GCC-12.2.0
CapnProto/0.10.3-GCCcore-12.2.0
CD-HIT/4.8.1-GCC-12.2.0
fastp/0.23.4-GCC-12.2.0
GenomeTools/1.6.2-GCC-12.2.0
HTSlib/1.17-GCC-12.2.0
ISA-L/2.30.0-GCCcore-12.2.0
KronaTools/2.8.1-GCCcore-12.2.0
libyaml/0.2.5-GCCcore-12.2.0
lpsolve/5.5.2.11-GCC-12.2.0
MAFFT/7.505-GCC-12.2.0-with-extensions
Mash/2.3-GCC-12.2.0
MetaEuk/6-GCC-12.2.0
MultiQC/1.14-foss-2022b
ncbi-vdb/3.0.5-gompi-2022b
parallel/20230722-GCCcore-12.2.0
pyfaidx/0.7.2.1-GCCcore-12.2.0
Pysam/0.21.0-GCC-12.2.0
python-isal/1.1.0-GCCcore-12.2.0
PyYAML/6.0-GCCcore-12.2.0
SAMtools/1.17-GCC-12.2.0
VCFtools/0.1.16-GCC-12.2.0
WhatsHap/2.1-foss-2022b

eessi-bot · 2024-09-17T12:08:53Z

Instance eessi-bot-mc-aws is configured to build for:

architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
repositories: eessi-hpc.org-2023.06-compat, eessi-hpc.org-2023.06-software, eessi.io-2023.06-software, eessi.io-2023.06-compat

eessi-build-deploy-bot-deucalion · 2024-09-17T12:08:53Z

Instance boegel-bot-deucalion is configured to build for:

architectures: aarch64/a64fx
repositories: eessi.io-2023.06-software

eessi-bot · 2024-09-17T12:08:54Z

Instance eessi-bot-mc-azure is configured to build for:

architectures: x86_64/amd/zen4
repositories: eessi-hpc.org-2023.06-compat, eessi.io-2023.06-compat, eessi-hpc.org-2023.06-software, eessi.io-2023.06-software

TopRichard · 2024-09-17T12:10:11Z

bot: build repo:eessi.io-2023.06-software arch:aarch64/generic

eessi-bot · 2024-09-17T12:10:14Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:
- submitted job 18854, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)

eessi-bot · 2024-09-17T12:10:15Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/generic from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/generic
handling command build repository:eessi.io-2023.06-software architecture:aarch64/generic resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-09-17T12:10:15Z

Updates by the bot instance boegel-bot-deucalion (click for details)

account TopRichard has NO permission to send commands to the bot

eessi-bot · 2024-09-17T12:10:19Z

New job on instance eessi-bot-mc-aws for architecture aarch64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18854

date	job status	comment
Sep 17 12:10:18 UTC 2024	submitted	job id `18854` awaits release by job manager
Sep 17 12:10:49 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 17 12:11:51 UTC 2024	running	job `18854` is running
Sep 17 13:22:02 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18854.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1726576358.tar.gz` size: 117 MiB (123676758 bytes) entries: 5738 modules under 2023.06/software/linux/aarch64/generic/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/aarch64/generic/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/aarch64/generic no other files in tarball
Sep 17 13:22:02 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 18/18 test case(s) from 18 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18854.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:08:14 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1726576358.tar.gz` to S3 bucket succeeded

TopRichard · 2024-09-18T06:05:07Z

bot: build repo:eessi.io-2023.06-software arch:x86_64/generic
bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/haswell
bot: build repo:eessi.io-2023.06-software arch:x86_64/intel/skylake_avx512
bot: build repo:eessi.io-2023.06-software arch:x86_64/amd/zen2
bot: build repo:eessi.io-2023.06-software arch:x86_64/amd/zen3
bot: build repo:eessi.io-2023.06-software arch:aarch64/neoverse_n1
bot: build repo:eessi.io-2023.06-software arch:aarch64/neoverse_v1

eessi-bot · 2024-09-18T06:05:10Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/generic from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/generic
received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/haswell from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell
received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/skylake_avx512 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512
received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen2 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2
received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen3 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3
received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_n1 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1
received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_v1 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1
handling command build repository:eessi.io-2023.06-software architecture:x86_64/generic resulted in:
- submitted job 18972, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell resulted in:
- submitted job 18973, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:
- submitted job 18974, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- submitted job 18975, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3 resulted in:
- submitted job 18976, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1 resulted in:
- submitted job 18977, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)
handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1 resulted in:
- submitted job 18978, for details & status see {2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706 (comment)

eessi-build-deploy-bot-deucalion · 2024-09-18T06:05:10Z

Updates by the bot instance boegel-bot-deucalion (click for details)

account TopRichard has NO permission to send commands to the bot

eessi-bot · 2024-09-18T06:05:10Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:x86_64/generic from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/generic
received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/haswell from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell
received bot command build repo:eessi.io-2023.06-software arch:x86_64/intel/skylake_avx512 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512
received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen2 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2
received bot command build repo:eessi.io-2023.06-software arch:x86_64/amd/zen3 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3
received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_n1 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1
received bot command build repo:eessi.io-2023.06-software arch:aarch64/neoverse_v1 from TopRichard
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1
handling command build repository:eessi.io-2023.06-software architecture:x86_64/generic resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/haswell resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:x86_64/intel/skylake_avx512 resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen2 resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:x86_64/amd/zen3 resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_n1 resulted in:
- no jobs were submitted
handling command build repository:eessi.io-2023.06-software architecture:aarch64/neoverse_v1 resulted in:
- no jobs were submitted

eessi-bot · 2024-09-18T06:05:14Z

New job on instance eessi-bot-mc-aws for architecture x86_64-generic for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18972

date	job status	comment
Sep 18 06:05:13 UTC 2024	submitted	job id `18972` awaits release by job manager
Sep 18 06:05:41 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:11:57 UTC 2024	running	job `18972` is running
Sep 18 06:36:34 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18972.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1726641036.tar.gz` size: 120 MiB (126222392 bytes) entries: 5738 modules under 2023.06/software/linux/x86_64/generic/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/x86_64/generic/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/x86_64/generic no other files in tarball
Sep 18 06:36:34 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18972.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:08:35 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1726641036.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:18Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-haswell for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18973

date	job status	comment
Sep 18 06:05:17 UTC 2024	submitted	job id `18973` awaits release by job manager
Sep 18 06:05:43 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:11:58 UTC 2024	running	job `18973` is running
Sep 18 06:37:40 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18973.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-haswell-1726641087.tar.gz` size: 121 MiB (127528625 bytes) entries: 5738 modules under 2023.06/software/linux/x86_64/intel/haswell/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/x86_64/intel/haswell/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/x86_64/intel/haswell no other files in tarball
Sep 18 06:37:40 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18973.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:08:56 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-haswell-1726641087.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:22Z

New job on instance eessi-bot-mc-aws for architecture x86_64-intel-skylake_avx512 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18974

date	job status	comment
Sep 18 06:05:21 UTC 2024	submitted	job id `18974` awaits release by job manager
Sep 18 06:05:45 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:12:00 UTC 2024	running	job `18974` is running
Sep 18 06:37:41 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18974.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1726641173.tar.gz` size: 121 MiB (127092500 bytes) entries: 5738 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Sep 18 06:37:41 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18974.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:09:17 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1726641173.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:26Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen2 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18975

date	job status	comment
Sep 18 06:05:25 UTC 2024	submitted	job id `18975` awaits release by job manager
Sep 18 06:05:37 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:10:50 UTC 2024	running	job `18975` is running
Sep 18 06:37:38 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18975.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1726641188.tar.gz` size: 121 MiB (127497940 bytes) entries: 5738 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
Sep 18 06:37:38 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18975.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:09:37 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1726641188.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:30Z

New job on instance eessi-bot-mc-aws for architecture x86_64-amd-zen3 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18976

date	job status	comment
Sep 18 06:05:29 UTC 2024	submitted	job id `18976` awaits release by job manager
Sep 18 06:05:39 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:10:52 UTC 2024	running	job `18976` is running
Sep 18 06:34:22 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18976.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen3-1726640871.tar.gz` size: 121 MiB (127483740 bytes) entries: 5738 modules under 2023.06/software/linux/x86_64/amd/zen3/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/x86_64/amd/zen3/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/x86_64/amd/zen3 no other files in tarball
Sep 18 06:34:22 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18976.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:09:58 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen3-1726640871.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:34Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_n1 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18977

date	job status	comment
Sep 18 06:05:33 UTC 2024	submitted	job id `18977` awaits release by job manager
Sep 18 06:05:35 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:10:49 UTC 2024	running	job `18977` is running
Sep 18 06:37:37 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18977.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_n1-1726641151.tar.gz` size: 117 MiB (123695363 bytes) entries: 5738 modules under 2023.06/software/linux/aarch64/neoverse_n1/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/aarch64/neoverse_n1/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/aarch64/neoverse_n1 no other files in tarball
Sep 18 06:37:37 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18977.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:10:20 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_n1-1726641151.tar.gz` to S3 bucket succeeded

eessi-bot · 2024-09-18T06:05:38Z

New job on instance eessi-bot-mc-aws for architecture aarch64-neoverse_v1 for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2024.09/pr_706/18978

date	job status	comment
Sep 18 06:05:37 UTC 2024	submitted	job id `18978` awaits release by job manager
Sep 18 06:06:46 UTC 2024	released	job awaits launch by Slurm scheduler
Sep 18 06:13:04 UTC 2024	running	job `18978` is running
Sep 18 06:34:20 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-18978.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-neoverse_v1-1726640927.tar.gz` size: 117 MiB (123712555 bytes) entries: 5738 modules under 2023.06/software/linux/aarch64/neoverse_v1/modules/all `BamTools/2.5.2-GCC-12.2.0.lua` `BCFtools/1.17-GCC-12.2.0.lua` `Bio-DB-HTS/3.01-GCC-12.2.0.lua` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0.lua` `Bowtie2/2.5.1-GCC-12.2.0.lua` `CapnProto/0.10.3-GCCcore-12.2.0.lua` `CD-HIT/4.8.1-GCC-12.2.0.lua` `fastp/0.23.4-GCC-12.2.0.lua` `GenomeTools/1.6.2-GCC-12.2.0.lua` `HTSlib/1.17-GCC-12.2.0.lua` `ISA-L/2.30.0-GCCcore-12.2.0.lua` `KronaTools/2.8.1-GCCcore-12.2.0.lua` `libyaml/0.2.5-GCCcore-12.2.0.lua` `lpsolve/5.5.2.11-GCC-12.2.0.lua` `MAFFT/7.505-GCC-12.2.0-with-extensions.lua` `Mash/2.3-GCC-12.2.0.lua` `MetaEuk/6-GCC-12.2.0.lua` `MultiQC/1.14-foss-2022b.lua` `ncbi-vdb/3.0.5-gompi-2022b.lua` `parallel/20230722-GCCcore-12.2.0.lua` `pyfaidx/0.7.2.1-GCCcore-12.2.0.lua` `Pysam/0.21.0-GCC-12.2.0.lua` `python-isal/1.1.0-GCCcore-12.2.0.lua` `PyYAML/6.0-GCCcore-12.2.0.lua` `SAMtools/1.17-GCC-12.2.0.lua` `VCFtools/0.1.16-GCC-12.2.0.lua` `WhatsHap/2.1-foss-2022b.lua` software under 2023.06/software/linux/aarch64/neoverse_v1/software `BamTools/2.5.2-GCC-12.2.0` `BCFtools/1.17-GCC-12.2.0` `Bio-DB-HTS/3.01-GCC-12.2.0` `Bio-SearchIO-hmmer/1.7.3-GCC-12.2.0` `Bowtie2/2.5.1-GCC-12.2.0` `CapnProto/0.10.3-GCCcore-12.2.0` `CD-HIT/4.8.1-GCC-12.2.0` `fastp/0.23.4-GCC-12.2.0` `GenomeTools/1.6.2-GCC-12.2.0` `HTSlib/1.17-GCC-12.2.0` `ISA-L/2.30.0-GCCcore-12.2.0` `KronaTools/2.8.1-GCCcore-12.2.0` `libyaml/0.2.5-GCCcore-12.2.0` `lpsolve/5.5.2.11-GCC-12.2.0` `MAFFT/7.505-GCC-12.2.0-with-extensions` `Mash/2.3-GCC-12.2.0` `MetaEuk/6-GCC-12.2.0` `MultiQC/1.14-foss-2022b` `ncbi-vdb/3.0.5-gompi-2022b` `parallel/20230722-GCCcore-12.2.0` `pyfaidx/0.7.2.1-GCCcore-12.2.0` `Pysam/0.21.0-GCC-12.2.0` `python-isal/1.1.0-GCCcore-12.2.0` `PyYAML/6.0-GCCcore-12.2.0` `SAMtools/1.17-GCC-12.2.0` `VCFtools/0.1.16-GCC-12.2.0` `WhatsHap/2.1-foss-2022b` other under 2023.06/software/linux/aarch64/neoverse_v1 no other files in tarball
Sep 18 06:34:20 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 9/9 test case(s) from 9 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-18978.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Sep 20 07:10:41 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-neoverse_v1-1726640927.tar.gz` to S3 bucket succeeded

bedroge

Skipped zen4, since 2022b is not supported.

eessi-build-deploy-bot-deucalion · 2024-09-20T07:07:53Z

Label bot:deploy has been set by user bedroge, but this person does not have permission to trigger deployments

eessi-bot · 2024-09-20T10:03:14Z

PR merged! Moved ['/project/def-users/SHARED/jobs/2024.09/pr_706/18854', '/project/def-users/SHARED/jobs/2024.09/pr_706/18972', '/project/def-users/SHARED/jobs/2024.09/pr_706/18973', '/project/def-users/SHARED/jobs/2024.09/pr_706/18974', '/project/def-users/SHARED/jobs/2024.09/pr_706/18975', '/project/def-users/SHARED/jobs/2024.09/pr_706/18976', '/project/def-users/SHARED/jobs/2024.09/pr_706/18977', '/project/def-users/SHARED/jobs/2024.09/pr_706/18978'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2024.09.20

eessi-bot · 2024-09-20T10:03:14Z

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2024.09.20

{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages

700f37a

TopRichard added the 2023.06-software.eessi.io 2023.06 version of software.eessi.io label Sep 17, 2024

Sync local branch with remote

bfeedc8

TopRichard added the ready-to-deploy Mark a PR as ready to deploy label Sep 18, 2024

bedroge approved these changes Sep 20, 2024

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bedroge added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Sep 20, 2024

bedroge merged commit 162a45a into EESSI:2023.06-software.eessi.io Sep 20, 2024
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{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706

{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706

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{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706

{2023.06}[GCCcore/12.2.0-GCC/12.2.0-gompi/2022b-foss/2022b] bio-packages #706

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