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Create SILVA SSU mapping file

Donovan Parks edited this page Oct 2, 2018 · 4 revisions

A mapping file is required in order to link the GTDB to results at SILVA. This is done through a TSV file parsed by the folks at SILVA.

This file is generated as follows:

  • TBD

The final mapping file should be placed in /srv/home/ftp/public/gtdb/releaseXX/silva_mapping_rXX.tsv and the link to the latest SILVA mapping file updated in /srv/home/ftp/public/gtdb/. This linked file is used by the SILVA team, i.e.: