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PR#504 (though really PR#365) resolved #350 by adding the deny-multiple-versions field to bans.deny entries, allowing specific crates to deny multiple versions while allowing/warning on them more generally. Thanks @leops!
PR#493 resolved #437 by also looking for deny configuration files in .cargo. Thanks @DJMcNab!
PR#503 resolved #498 by falling back to more lax parsing of the SPDX expression of crate if fails to parse according to the stricter but more correct rules.