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Replace pymemesuite FIMO implementation with tangermeme #45

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adamklie opened this issue Sep 6, 2024 · 0 comments
Closed

Replace pymemesuite FIMO implementation with tangermeme #45

adamklie opened this issue Sep 6, 2024 · 0 comments
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@adamklie @aron0093
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enhancement New feature or request evaluations
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2024 Gene Program...

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@adamklie
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adamklie commented Sep 6, 2024

Current scripted implementation: https://github.com/EngreitzLab/gene_network_evaluation/blob/jamboree-gene-programs-2024/app/tests/motif_enrichment.ipynb

Was failing due to documented tangermeme issue: jmschrei/tangermeme#18

Could be fixed with v0.0.3 release today
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enhancement New feature or request evaluations
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2024 Gene Program Jamboree
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@adamklie @aron0093