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Data mining pipeline of scRNAseq data for HNSC (Head and Neck Cancer) obtained from GSE164690. This repository includes the full R scripts.

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Novel cytokine-induced memory-like (CIML) NK cells were associated with circulating immune microenvironment

Pipeline for scRNA-seq data analysis of HNSCC data obtained from GSE164690


Figure 1. Clinical information for data

Figure 2. NK cell extraction

Figure 3. Cytokine-induced memory-like NK

Figure 4. NK subsets support different biological functions

Figure 5. Trajectories of NK cell differentiation in blood

Figure 6. The DEA between HPV+ and HPV- NK subsets

Figure 7. Evaluation of prognosis outcomes of NK subsets between HPV+ and HPV- HNSCC patients

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Data mining pipeline of scRNAseq data for HNSC (Head and Neck Cancer) obtained from GSE164690. This repository includes the full R scripts.

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