SOF-7506: entity types fixes

dist/js/constants.d.ts

@@ -1,24 +1,24 @@
 export namespace coefficients {
-    const EV_TO_RY: number;
-    const BOHR_TO_ANGSTROM: number;
-    const ANGSTROM_TO_BOHR: number;
-    const EV_A_TO_RY_BOHR: number;
+    let EV_TO_RY: number;
+    let BOHR_TO_ANGSTROM: number;
+    let ANGSTROM_TO_BOHR: number;
+    let EV_A_TO_RY_BOHR: number;
 }
 export namespace tolerance {
-    const length: number;
-    const lengthAngstrom: number;
-    const pointsDistance: number;
+    let length: number;
+    let lengthAngstrom: number;
+    let pointsDistance: number;
 }
 export namespace units {
-    const bohr: string;
-    const angstrom: string;
-    const degree: string;
-    const radian: string;
-    const alat: string;
+    let bohr: string;
+    let angstrom: string;
+    let degree: string;
+    let radian: string;
+    let alat: string;
 }
 export namespace ATOMIC_COORD_UNITS {
-    const crystal: string;
-    const cartesian: string;
+    let crystal: string;
+    let cartesian: string;
 }
 export const HASH_TOLERANCE: 3;
 declare namespace _default {

dist/js/context/mixins.d.ts

@@ -17,8 +17,8 @@ export declare function MaterialContextMixin<T extends Constructor>(superclass:
         _material: Material;
         extraData?: {
             materialHash: string;
-        } | undefined;
-        isEdited?: boolean | undefined;
+        };
+        isEdited?: boolean;
         readonly isEditedIsSetToFalseOnMaterialUpdate: boolean;
         updateMaterialHash(): void;
         readonly isMaterialCreatedDefault: boolean;
@@ -46,10 +46,10 @@ export declare function MethodDataContextMixin<T extends Constructor>(superclass
         [x: string]: any;
         _methodData: any;
         isEdited: boolean;
-        methodDataHash?: string | undefined;
+        methodDataHash?: string;
         extraData?: {
-            methodDataHash?: string | undefined;
-        } | undefined;
+            methodDataHash?: string;
+        };
         _initMethodDataHash(): void;
         readonly methodData: any;
         readonly isMethodDataUpdated: boolean;

dist/js/context/mixins.js

@@ -3,7 +3,13 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.JobContextMixin = exports.WorkflowContextMixin = exports.MethodDataContextMixin = exports.MaterialsContextMixin = exports.MaterialsSetContextMixin = exports.MaterialContextMixin = exports.ApplicationContextMixin = void 0;
+exports.ApplicationContextMixin = ApplicationContextMixin;
+exports.MaterialContextMixin = MaterialContextMixin;
+exports.MaterialsSetContextMixin = MaterialsSetContextMixin;
+exports.MaterialsContextMixin = MaterialsContextMixin;
+exports.MethodDataContextMixin = MethodDataContextMixin;
+exports.WorkflowContextMixin = WorkflowContextMixin;
+exports.JobContextMixin = JobContextMixin;
 const crypto_js_1 = __importDefault(require("crypto-js"));
 const utils_1 = require("../entity/set/ordered/utils");
 function ApplicationContextMixin(superclass) {
@@ -25,7 +31,6 @@ function ApplicationContextMixin(superclass) {
         }
     };
 }
-exports.ApplicationContextMixin = ApplicationContextMixin;
 function MaterialContextMixin(superclass) {
     return class MaterialContextMixin extends superclass {
         constructor(...args) {
@@ -64,7 +69,6 @@ function MaterialContextMixin(superclass) {
         }
     };
 }
-exports.MaterialContextMixin = MaterialContextMixin;
 function MaterialsSetContextMixin(superclass) {
     return class MaterialsSetContextMixin extends superclass {
         constructor(...params) {
@@ -82,7 +86,6 @@ function MaterialsSetContextMixin(superclass) {
         }
     };
 }
-exports.MaterialsSetContextMixin = MaterialsSetContextMixin;
 function MaterialsContextMixin(superclass) {
     return class MaterialsContextMixin extends superclass {
         constructor(...params) {
@@ -103,7 +106,6 @@ function MaterialsContextMixin(superclass) {
         }
     };
 }
-exports.MaterialsContextMixin = MaterialsContextMixin;
 function MethodDataContextMixin(superclass) {
     return class extends superclass {
         constructor(...params) {
@@ -142,7 +144,6 @@ function MethodDataContextMixin(superclass) {
         }
     };
 }
-exports.MethodDataContextMixin = MethodDataContextMixin;
 function WorkflowContextMixin(superclass) {
     return class extends superclass {
         constructor(...params) {
@@ -156,7 +157,6 @@ function WorkflowContextMixin(superclass) {
         }
     };
 }
-exports.WorkflowContextMixin = WorkflowContextMixin;
 function JobContextMixin(superclass) {
     return class extends superclass {
         constructor(...params) {
@@ -170,4 +170,3 @@ function JobContextMixin(superclass) {
         }
     };
 }
-exports.JobContextMixin = JobContextMixin;

dist/js/context/registry.d.ts

@@ -1,6 +1,6 @@
 export class ContextProviderRegistryContainer {
     _providers: any[];
-    set providers(arg: any[]);
+    set providers(p: any[]);
     get providers(): any[];
     addProvider({ name, instance }: {
         name: any;

dist/js/entity/in_memory.d.ts

@@ -1,6 +1,6 @@
 import { AnyObject } from "@mat3ra/esse/dist/js/esse/types";
 import { JSONSchema } from "@mat3ra/esse/dist/js/esse/utils";
-import { EntityReferenceSchema } from "@mat3ra/esse/dist/js/types";
+import { BaseInMemoryEntitySchema, EntityReferenceSchema } from "@mat3ra/esse/dist/js/types";
 export declare enum ValidationErrorCode {
     IN_MEMORY_ENTITY_DATA_INVALID = "IN_MEMORY_ENTITY_DATA_INVALID"
 }
@@ -17,7 +17,7 @@ export declare class EntityError extends Error {
         details?: ErrorDetails;
     });
 }
-export declare class InMemoryEntity {
+export declare class InMemoryEntity implements BaseInMemoryEntitySchema {
     static create(config: object): InMemoryEntity;
     static _isDeepCloneRequired: boolean;
     static allowJsonSchemaTypesCoercing: boolean;
@@ -56,13 +56,9 @@ export declare class InMemoryEntity {
     validate(): void;
     clean(config: AnyObject): AnyObject;
     isValid(): boolean;
-    get id(): string;
-    set id(id: string);
     static get cls(): string;
     get cls(): string;
     getClsName(): string;
-    get slug(): string;
-    get isSystemEntity(): boolean;
     /**
      * @summary get small identifying payload of object
      * @param byIdOnly if true, return only the id
@@ -77,6 +73,16 @@ export declare class InMemoryEntity {
      * @param name the name of the entity to choose
      */
     getEntityByName(entities: InMemoryEntity[], entity: string, name: string): InMemoryEntity;
+    get id(): string;
+    set id(id: string);
+    get _id(): string;
+    set _id(id: string);
+    get schemaVersion(): string;
+    set schemaVersion(schemaVersion: string);
+    get systemName(): string;
+    set systemName(systemName: string);
+    get slug(): string;
+    get isSystemEntity(): boolean;
 }
 export type InMemoryEntityConstructor<T extends InMemoryEntity = InMemoryEntity> = new (...args: any[]) => T;
 export {};

dist/js/entity/in_memory.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
@@ -35,7 +45,7 @@ const clone_1 = require("../utils/clone");
 var ValidationErrorCode;
 (function (ValidationErrorCode) {
     ValidationErrorCode["IN_MEMORY_ENTITY_DATA_INVALID"] = "IN_MEMORY_ENTITY_DATA_INVALID";
-})(ValidationErrorCode = exports.ValidationErrorCode || (exports.ValidationErrorCode = {}));
+})(ValidationErrorCode || (exports.ValidationErrorCode = ValidationErrorCode = {}));
 class EntityError extends Error {
     constructor({ code, details }) {
         super(code);
@@ -160,12 +170,6 @@ class InMemoryEntity {
             return false;
         }
     }
-    get id() {
-        return this.prop("_id", "");
-    }
-    set id(id) {
-        this.setProp("_id", id);
-    }
     static get cls() {
         return this.prototype.constructor.name;
     }
@@ -176,12 +180,6 @@ class InMemoryEntity {
     getClsName() {
         return this.constructor.name;
     }
-    get slug() {
-        return this.prop("slug", "");
-    }
-    get isSystemEntity() {
-        return Boolean(this.prop("systemName", ""));
-    }
     /**
      * @summary get small identifying payload of object
      * @param byIdOnly if true, return only the id
@@ -220,6 +218,37 @@ class InMemoryEntity {
         }
         return filtered[0];
     }
+    // Properties from BaseInMemoryEntitySchema
+    get id() {
+        return this.prop("_id", "");
+    }
+    set id(id) {
+        this.setProp("_id", id);
+    }
+    get _id() {
+        return this.prop("_id", "");
+    }
+    set _id(id) {
+        this.setProp("_id", id);
+    }
+    get schemaVersion() {
+        return this.prop("schemaVersion", "");
+    }
+    set schemaVersion(schemaVersion) {
+        this.setProp("schemaVersion", schemaVersion);
+    }
+    get systemName() {
+        return this.prop("systemName", "");
+    }
+    set systemName(systemName) {
+        this.setProp("systemName", systemName);
+    }
+    get slug() {
+        return this.prop("slug", "");
+    }
+    get isSystemEntity() {
+        return Boolean(this.systemName);
+    }
 }
 exports.InMemoryEntity = InMemoryEntity;
 // Override if deepClone of config is required

dist/js/entity/index.js

@@ -15,13 +15,23 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.FlowchartItemMixin = exports.FlowchartEntityMixin = exports.ContextAndRenderFieldsMixin = exports.OrderedInMemoryEntityInSetMixin = exports.OrderedInMemoryEntitySetMixin = exports.InMemoryEntityInSetMixin = exports.InMemoryEntitySetMixin = exports.selectorsForEntitySet = exports.constructEntitySetFactoryByConfig = exports.ENTITY_SET_TYPES = exports.InMemoryEntitySet = exports.HashedInputArrayMixin = exports.RuntimeContextFieldMixin = exports.RuntimeItemsMixin = exports.NamedEntityMixin = exports.HasScopeTrackMixin = exports.TaggableMixin = exports.HasMetadataMixin = exports.HasDescriptionMixin = exports.DefaultableMixin = exports.HasConsistencyChecksMixin = exports.HasConsistencyChecksHasMetadataNamedDefaultableInMemoryEntity = exports.NamedDefaultableRepetitionRuntimeItemsImportantSettingsContextAndRenderHashedInMemoryEntity = exports.NamedDefaultableRepetitionImportantSettingsInMemoryEntity = exports.NamedDefaultableRepetitionContextAndRenderInMemoryEntity = exports.HasMetadataNamedDefaultableInMemoryEntity = exports.NamedDefaultableInMemoryEntity = exports.DefaultableInMemoryEntity = exports.NamedInMemoryEntity = exports.InMemoryEntity = void 0;
 const in_memory_1 = require("./in_memory");