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v0.18.2 - Hotfix release for ambiguous alignments

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@FelixKrueger FelixKrueger released this 28 Jun 08:45
· 535 commits to master since this release

Bismark

  • Changed the timing of when ambiguous within same thread alignments are reset. Previously some alignments were incorrectly considered ambiguous (see here). This affected Bowtie 2 alignments only.

bismark2bedGraph

  • The option --ample_mem is now mutually exclusive with specifying memory for the UNIX sort command via the option --buffer_size.