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David Lauzon edited this page Apr 27, 2015
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ADAM Format
Avro source
The ADAM project is a genomics processing engine and specialized file format built using Apache Avro, Apache Spark and Parquet.
For MGL804, we're only interested in ADAM's file format (or data model) which can be found as a separate project called BDG-Formats. This project can be added as a maven dependency.
Here is a direct link to the BDG-Format's Avro source. This Avro file can be used to generate a model layer in Java.