Genomic Medicine Linköping
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var-genes-ro
var-genes-ro PublicVirulence and Antibiotic Resistance Genes used with JASEN pipeline at the university hospital of Linköping, Sweden.
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Repositories
- gms-artic Public Forked from genomic-medicine-sweden/gms-artic
A nextflow pipeline with a GMS touch for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics).
Genomic-Medicine-Linkoping/gms-artic’s past year of commit activity - JASEN Public Forked from genomic-medicine-sweden/jasen
Epitypification pipeline for clinical NGS data. Written in NextFlow, Python & Bash.
Genomic-Medicine-Linkoping/JASEN’s past year of commit activity - pgx_module Public Forked from JoelAAs/pgx_module
Anlysis of pharmacogenomic targets from Genomic Medicine Swedens heamatology panel.
Genomic-Medicine-Linkoping/pgx_module’s past year of commit activity - raredisease Public Forked from nf-core/raredisease
Call and score variants from WGS/WES of rare disease patients.
Genomic-Medicine-Linkoping/raredisease’s past year of commit activity - gmsmetapost Public Forked from genomic-medicine-sweden/gmsmetapost
GMS Metagenomics post-classification
Genomic-Medicine-Linkoping/gmsmetapost’s past year of commit activity - KITM_fastq_preprocessing Public Forked from ljmesi/KITM_fastq_preprocessing
QC and trimming of fastq reads
Genomic-Medicine-Linkoping/KITM_fastq_preprocessing’s past year of commit activity - snakemake-wrappers Public Forked from snakemake/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
Genomic-Medicine-Linkoping/snakemake-wrappers’s past year of commit activity
