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Python library to load channels in EDF files as a pandas dataframe.

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Python library to load channels in EDF files as dictionaries, with support for train/test set splitting.

Setup

pip3 install -e .

Usage

from Loader import Loader, samplify

loader = Loader("path/to/edf/folder", ["O1-A2"], ["SAO2"])

for x, y in loader.load():
    # do something with data here

x and y will be dictionaries with channel names as the keys. and dictionaries with sampling frequency and data key-value pairs.

x = {
    "eog_l": {"sampling_frequency": 100, "data":[...]},
    "eog_r": {"sampling_frequency": 100, "data":[...]}
}

y = {
    "spo2": {"sampling_frequency": 1, "data": [...]}
}

Samplify:

data = { 
    'eog':{
        'sampling_frequency':2, 
        'data':[1, 2 ,3 ,4, 5, 6]
    }
}
#data contains the channel 'eog' which has a
# 3-second recording of a 2Hz signal(6 samples)
#samplify will split the data into 1 second 
# rercordings
sampled_data = samplify(data, 1)
# sampled_data = {
#     'eog':{
#         'sampling_frequency':2,
#         'data':[[1,2],[3,4],[5,6]]
#     }
# }

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Python library to load channels in EDF files as a pandas dataframe.

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