Merge pull request #132 from ypriverol/master

DIA-NN added
HUPO-PSI · Apr 29, 2022 · ab550c7 · ab550c7
2 parents afcc2fa + 69297b1
commit ab550c7
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Showing 2 changed files with 33 additions and 6 deletions.
diff --git a/psi-ms.obo b/psi-ms.obo
@@ -1,7 +1,7 @@
 format-version: 1.2
-data-version: 4.1.84
-date: 08:04:2022 12:51
-saved-by: Joshua Klein
+data-version: 4.1.85
+date: 27:04:2022 12:51
+saved-by: Yasset Perez-Riverol
 auto-generated-by: OBO-Edit 2.3.1
 import: http://purl.obolibrary.org/obo/pato.obo
 import: http://purl.obolibrary.org/obo/uo.obo
@@ -22938,6 +22938,13 @@ relationship: has_optional_column MS:1001844 ! MS1 feature area
 relationship: has_optional_column MS:1001843 ! MS1 feature maximum intensity
 relationship: has_optional_column MS:1003085 ! previous MSn-1 scan precursor intensity
 
+[Term]
+id: MS:1003253
+name: DIA-NN
+def: "A universal software for data-independent acquisition (DIA) proteomics data processing" [PMID:31768060, https://github.com/vdemichev/DiaNN]
+is_a: MS:1001139 ! quantitation software name
+is_a: MS:1001456 ! analysis software
+
 [Term]
 id: PEFF:0000001
 name: PEFF CV term

diff --git a/psi-ms.owl b/psi-ms.owl
@@ -30,17 +30,17 @@
      xmlns:ncbitaxon="http://purl.obolibrary.org/obo/ncbitaxon#"
      xmlns:oboInOwl1="oboInOwl:">
     <owl:Ontology rdf:about="http://purl.obolibrary.org/obo/ms.owl">
-        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/ms/4.1.84/ms.owl"/>
+        <owl:versionIRI rdf:resource="http://purl.obolibrary.org/obo/ms/4.1.85/ms.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/pato.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/stato.owl"/>
         <owl:imports rdf:resource="http://purl.obolibrary.org/obo/uo.owl"/>
         <oboInOwl:NamespaceIdRule rdf:datatype="http://www.w3.org/2001/XMLSchema#string">* MS:$sequence(7,0,9999999)$</oboInOwl:NamespaceIdRule>
         <oboInOwl:NamespaceIdRule rdf:datatype="http://www.w3.org/2001/XMLSchema#string">* PEFF:$sequence(7,0,9999999)$</oboInOwl:NamespaceIdRule>
         <oboInOwl:auto-generated-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">OBO-Edit 2.3.1</oboInOwl:auto-generated-by>
-        <oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">08:04:2022 12:51</oboInOwl:date>
+        <oboInOwl:date rdf:datatype="http://www.w3.org/2001/XMLSchema#string">27:04:2022 12:51</oboInOwl:date>
         <oboInOwl:default-namespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:default-namespace>
         <oboInOwl:hasOBOFormatVersion rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.2</oboInOwl:hasOBOFormatVersion>
-        <oboInOwl:saved-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Joshua Klein</oboInOwl:saved-by>
+        <oboInOwl:saved-by rdf:datatype="http://www.w3.org/2001/XMLSchema#string">Yasset Perez-Riverol</oboInOwl:saved-by>
         <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">For any queries contact [email protected]</rdfs:comment>
         <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">This work is licensed under the Creative Commons Attribution 4.0 International (CC BY 4.0) license.</rdfs:comment>
         <rdfs:comment rdf:datatype="http://www.w3.org/2001/XMLSchema#string">To view a copy of this license, visit https://creativecommons.org/licenses/by/4.0/ or send a letter to Creative Commons, 444 Castro Street, Suite 900, Mountain View, California, 94041, USA.</rdfs:comment>
@@ -74858,6 +74858,26 @@
 
 
 
+    <!-- http://purl.obolibrary.org/obo/MS_1003253 -->
+
+    <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_1003253">
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1001139"/>
+        <rdfs:subClassOf rdf:resource="http://purl.obolibrary.org/obo/MS_1001456"/>
+        <obo:IAO_0000115 rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A universal software for data-independent acquisition (DIA) proteomics data processing</obo:IAO_0000115>
+        <oboInOwl:hasOBONamespace rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS</oboInOwl:hasOBONamespace>
+        <oboInOwl:id rdf:datatype="http://www.w3.org/2001/XMLSchema#string">MS:1003253</oboInOwl:id>
+        <rdfs:label rdf:datatype="http://www.w3.org/2001/XMLSchema#string">DIA-NN</rdfs:label>
+    </owl:Class>
+    <owl:Axiom>
+        <owl:annotatedSource rdf:resource="http://purl.obolibrary.org/obo/MS_1003253"/>
+        <owl:annotatedProperty rdf:resource="http://purl.obolibrary.org/obo/IAO_0000115"/>
+        <owl:annotatedTarget rdf:datatype="http://www.w3.org/2001/XMLSchema#string">A universal software for data-independent acquisition (DIA) proteomics data processing</owl:annotatedTarget>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">PMID:31768060</oboInOwl:hasDbXref>
+        <oboInOwl:hasDbXref rdf:datatype="http://www.w3.org/2001/XMLSchema#string">https://github.com/vdemichev/DiaNN</oboInOwl:hasDbXref>
+    </owl:Axiom>
+
+
+
     <!-- http://purl.obolibrary.org/obo/MS_4000000 -->
 
     <owl:Class rdf:about="http://purl.obolibrary.org/obo/MS_4000000">