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Log selected slices #144

Merged
merged 10 commits into from
Mar 24, 2022
Merged

Log selected slices #144

merged 10 commits into from
Mar 24, 2022

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Jasperhino
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@Jasperhino Jasperhino commented Mar 11, 2022

This PR adds the logging of iteration, case_id, image_path, image_id, slice_index and pseudo_label to wandb.

closes #138

The ActiveLearning Pipeline now holds a wandb.Table object where these values are appended and logged every active learning iteration.

@jonaskordt
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Code looks fine to me. Let's wait for a test run to see the resulting data.

@Jasperhino Jasperhino changed the title Feature - Log selected slices Log selected slices Mar 11, 2022
@Jasperhino Jasperhino added the enhancement New feature or request label Mar 11, 2022
@Jasperhino
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@josafatburmeister could you provide a link to a wandb run with working logging? Should also be interesting for #145

@josafatburmeister
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@josafatburmeister could you provide a link to a wandb run with working logging? Should also be interesting for #145

This one should work: https://wandb.ai/active-segmentation/active-segmentation-tests/runs/3w0quvns

@Jasperhino Jasperhino merged commit 0da7e13 into main Mar 24, 2022
@Ijusttyped Ijusttyped deleted the feature/log-selected-slices branch June 20, 2022 10:00
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log slices selected by strategies and interpolated slices
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