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Fix zFPKM Calculation #210

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The current zFPKM implementation calculates zFPKM down a column (using entire samples). This fixes the calculation to work across rows (on a single gene across all samples)

@JoshLoecker JoshLoecker changed the base branch from develop to remove-hardcoded-paths/merge-xomics December 17, 2024 21:33
@JoshLoecker JoshLoecker requested a review from Copilot December 17, 2024 21:33
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Copilot reviewed 2 out of 2 changed files in this pull request and generated 2 comments.

Comments suppressed due to low confidence (1)

main/como/rnaseq_gen.py:732

  • [nitpick] The parameter name 'taxon_id' is inconsistent with 'taxon' used elsewhere. Consider standardizing to 'taxon'.
taxon_id: int,

main/como/rnaseq_gen.py Outdated Show resolved Hide resolved
main/como/rnaseq_gen.py Outdated Show resolved Hide resolved
Signed-off-by: Josh Loecker <[email protected]>
Signed-off-by: Josh Loecker <[email protected]>
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