ADIA-Study-2

#Description for ADIA study 2 folder organization

1. "Data". This folder include all data created and used for ADIA-study 2 analysis
   
2. "SAS Program". This folder include SAS program of data management and cleaning
   i."MH_SUD_outcomes.sas" create "any mental health" and "any suicidal attempt" outcomes
   ii."RiskBeh_Outcome.sas" create any risk behavior outcomes
   iii."PCE_correct_neigh_safety.sas" create positive childhood experiences
   iv."OCS_expanded_ACE.sas" create expanded ACEs and OCS
   v."Merge_long.sas" merge all demographics, expanded ACES and OCS, PCEs and outcomes to a long datafile by child ID and time
   vi."Merge.sas" merge all demographics, expanded ACES and OCS, PCEs and outcomes to flat datafile by child ID
   vii."agg_LS.sas" create a summary data with demographics, expanded ACES and OCS, PCEs and outcomes
   
3. "Analysis". Each subfolder include the analysis for each outcome with the following program codes
   
   i. "1.Matching.tree.r" code implement the "matching case-control" analysis as well as running "classical regression tree" analysis
   ii."2.Causaltree.r" code implement the "causal regression tree analysis
   iii."3.Matching.pclogit.r" code implement the Penalised conditional logistic regression analysis
   iv. "4.Bayesian clogit with horse shoe.r" code implement Bayesian clogit analysis
   
4. "Descriptive". This folder include SAS program for the ad-hoc descriptive analysis
   i."Descriptive_table.sas" create the descriptive frequency tables
   ii."crosstabfreqs_add_neigh_safety.sas" create the descriptive frequency tables for PCEs "supportive environment" measures
   iii."crosstabfreqs.sas" create the crosstabulation
   
5. "R". External function to find the balancing weights for "causal tree" analysis
   -"find.weights.r"
   
6. "Output" folder