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fast-median

Median estimator

Python implementation of real time median estimator

Publication

For an explanation of the algorithm see

Burman, Solé-Casals, Lew (2024) Robust and Memory-less Median Estimation for Real-Time Spike Detection

Extracellular recording used to validate the estimator

DOI: 10.5281/zenodo.13895772

Installation

Create a virtual environment

python3 -m venv env
source env/bin/activate
pip install --upgrade pip setuptools
pip install -r requirements.txt
pip install -e .

Tests

python -m median.tests.test_new_median
python -m median.tests.test_new_median_int

Development and plots

pip install -r requirements.dev.txt

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