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* text=auto |
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# Byte-compiled / optimized / DLL files | ||
__pycache__/ | ||
*.py[cod] | ||
*$py.class | ||
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# C extensions | ||
*.so | ||
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# Distribution / packaging | ||
.Python | ||
build/ | ||
develop-eggs/ | ||
dist/ | ||
downloads/ | ||
eggs/ | ||
.eggs/ | ||
lib/ | ||
lib64/ | ||
parts/ | ||
sdist/ | ||
var/ | ||
wheels/ | ||
*.egg-info/ | ||
.installed.cfg | ||
*.egg | ||
MANIFEST | ||
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# PyInstaller | ||
# Usually these files are written by a python script from a template | ||
# before PyInstaller builds the exe, so as to inject date/other infos into it. | ||
*.manifest | ||
*.spec | ||
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# Installer logs | ||
pip-log.txt | ||
pip-delete-this-directory.txt | ||
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# Unit test / coverage reports | ||
htmlcov/ | ||
.tox/ | ||
.coverage | ||
.coverage.* | ||
.cache | ||
nosetests.xml | ||
coverage.xml | ||
*.cover | ||
.hypothesis/ | ||
.pytest_cache/ | ||
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# Translations | ||
*.mo | ||
*.pot | ||
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# Django stuff: | ||
*.log | ||
local_settings.py | ||
db.sqlite3 | ||
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# Flask stuff: | ||
instance/ | ||
.webassets-cache | ||
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# Scrapy stuff: | ||
.scrapy | ||
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# Sphinx documentation | ||
docs/_build/ | ||
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# PyBuilder | ||
target/ | ||
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# Jupyter Notebook | ||
.ipynb_checkpoints | ||
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# pyenv | ||
.python-version | ||
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# celery beat schedule file | ||
celerybeat-schedule | ||
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# SageMath parsed files | ||
*.sage.py | ||
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# Environments | ||
.env | ||
.venv | ||
env/ | ||
venv/ | ||
ENV/ | ||
env.bak/ | ||
venv.bak/ | ||
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# Spyder project settings | ||
.spyderproject | ||
.spyproject | ||
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# Rope project settings | ||
.ropeproject | ||
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# mkdocs documentation | ||
/site | ||
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# mypy | ||
.mypy_cache/ |
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This product includes third party software (“Third Party Programs”). Some of the Third Party Programs are available under open source | ||
or free software licenses. The License Agreement accompanying the Licensed Software does not alter any rights or obligations you may | ||
have under those open source or free software licenses. The licenses that govern the terms and conditions of use of the Third Party | ||
Programs included in the Licensed Software are provided in this file. This document also contains copyright statements for the various | ||
open source software components (or portions thereof) that are distributed with the Licensed Software. | ||
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************************************************************************************* | ||
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The following components are covered under the MIT license | ||
• six-1.12.0-py2.py3-none-any.whl Copyright 2010-2018 Benjamin Peterson | ||
• pysam-0.15.1-cp36-cp36m-manylinux1_x86_64.whl © 2009 Genome Research Ltd | ||
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MIT License | ||
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Permission is hereby granted, free of charge, to any person obtaining a copy of this software and associated documentation files (the | ||
"Software"), to deal in the Software without restriction, including without limitation the rights to use, copy, modify, merge, publish, | ||
distribute, sublicense, and/or sell copies of the Software, and to permit persons to whom the Software is furnished to do so, subject | ||
to the following conditions: | ||
The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. | ||
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF | ||
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR | ||
ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH | ||
THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. | ||
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************************************************************************************ | ||
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The following components are covered under the BSD-3 license | ||
• statsmodels-0.9.0-cp36-cp36m-manylinux1_x86_64.whl © 2018 Josef Perktold, Skipper Seabold, Jonathan Taylor, statsmodels-developers | ||
• numpy-1.16.3-cp36-cp36m-manylinux1_x86_64.whl "Copyright 2009 Free Software Foundation, Inc; Copyright 2007 Free Software Foundation, | ||
Inc.; Copyright 1992-2013 The University of Tennessee and The University; Copyright 2002-2017 Free Software Foundation, Inc.; Copyright | ||
2005-2019 NumPy Developers; Copyright 2006-2013 The University of Colorado Denver; Copyright 2000-2013 The University of California | ||
Berkeley; and Copyright 2011-2014 The OpenBLAS Project" | ||
• scipy-1.2.1-cp36-cp36m-manylinux1_x86_64.whl "Copyright 2009 Free Software Foundation, Inc; Copyright 1984-1995 2000 by Stephen L; | ||
Copyright 2007 Free Software Foundation, Inc; Copyright 1992-2013 The University of Tennessee and The University; Copyright 2003-2017 | ||
SciPy Developers; Copyright 2002-2017 Free Software Foundation, Inc; Copyright 2012 Massachusetts Institute of Technology; Copyright | ||
2006-2013 The University of Colorado Denver; Copyright 2003-2009 The Regents of the University of California; Copyright 2000-2013 The | ||
University of California Berkeley; Copyright 2001-2002 Enthought, Inc; and Copyright 2011-2014 The OpenBLAS Project" | ||
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BSD-3 License | ||
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions | ||
are met: | ||
* Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. | ||
* Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the | ||
documentation and/or other materials provided with the distribution. | ||
* Neither the name of the Copyright Holders nor the names of its contributors may be used to endorse or promote products derived from | ||
this software without specific prior written permission. | ||
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT | ||
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE | ||
COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, | ||
BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER | ||
CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN | ||
ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | ||
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Code generated by the Protocol Buffer compiler is owned by the owner of the input file used when generating it. This code is not | ||
standalone and requires a support library to be linked with it. This support library is itself covered by the above license. | ||
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************************************************************************************* | ||
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The following component is covered under the BSD-2 license | ||
• patsy-0.5.1-py2.py3-none-any.whl © 2012 Patsy Developers | ||
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BSD-2 License | ||
Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions | ||
are met: | ||
1. Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. | ||
2. Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in | ||
the documentation and/or other materials provided with the distribution. | ||
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT | ||
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE | ||
COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES | ||
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) | ||
HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. | ||
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************************************************************************************************************************** | ||
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For the programs or components that are licensed under an open source license that gives you the right to receive the source code for | ||
that binary, you can obtain a copy of the applicable source code on physical media by submitting a written request to: | ||
Illumina, Inc. | ||
Attn: Legal Department | ||
5200 Illumina Way | ||
San Diego, CA 92122 | ||
We may charge you a fee to cover the cost of physical media and processing. Your request must be sent (i) within three (3) years of | ||
the date you received the Illumina product that included the component or binary file(s) that are the subject of your request. |
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