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feat: version related updates
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J-81 committed May 10, 2023
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7 changes: 7 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -5,6 +5,12 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [1.3.3]

### Added

- Support for data asset key sets and run components in updated validation interface (i.e. by 'dpt validation')

## [1.3.2]

### Fixed
Expand Down Expand Up @@ -185,3 +191,4 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
[1.3.0]: https://github.com/j-81/dp_tools/compare/1.2.1...1.3.0
[1.3.1]: https://github.com/j-81/dp_tools/compare/1.3.0...1.3.1
[1.3.2]: https://github.com/j-81/dp_tools/compare/1.3.1...1.3.2
[1.3.3]: https://github.com/j-81/dp_tools/compare/1.3.2...1.3.3
8 changes: 4 additions & 4 deletions dp_tools/__init__.py
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Expand Up @@ -28,7 +28,7 @@
#### Using pip
> pip install git+https://github.com/J-81/[email protected].2
> pip install git+https://github.com/J-81/[email protected].3
## CLI Commands
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``` bash
# First two lines tell Singularity to run the dp_tools container in the current working directory
singularity exec --bind $(pwd):$(pwd) \\
docker://quay.io/j_81/dp_tools:1.3.2 \\
docker://quay.io/j_81/dp_tools:1.3.3 \\
dpt-get-isa-archive --accession GLDS-168 # command we want to run
```
#### Convert ISA Archive into bulkRNASeq Runsheet
``` bash
# First two lines tell Singularity to run the dp_tools container in the current working directory
singularity exec --bind $(pwd):$(pwd) \\
docker://quay.io/j_81/dp_tools:1.3.2 \\
docker://quay.io/j_81/dp_tools:1.3.3 \\
dpt-isa-to-runsheet --accession GLDS-168 \\
--config-type bulkRNASeq \\
--config-version Latest \\
--isa-archive GLDS-168_metadata_GLDS-168-ISA.zip # command we want to run
```
"""
__version__ = "1.3.2"
__version__ = "1.3.3"
14 changes: 12 additions & 2 deletions setup.py
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Expand Up @@ -12,7 +12,7 @@

setup(
name="dp_tools",
version="1.3.2",
version="1.3.3",
description="Tooling for Data Processing Operations",
author="Jonathan Oribello",
author_email="[email protected]",
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},
include_package_data=True,
python_requires=">=3.10",
install_requires=["requests", "pyyaml", "pandas==1.4.4", "schema", "tabulate", "multiqc", "pandera", "click", "loguru"],
install_requires=[
"requests",
"pyyaml",
"pandas==1.4.4",
"schema",
"tabulate",
"multiqc",
"pandera",
"click",
"loguru",
],
setup_requires=[],
tests_require=["pytest", "pytest-console_scripts"],
entry_points={
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