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feat: update documentation for version
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J-81 committed Mar 31, 2023
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8 changes: 8 additions & 0 deletions CHANGELOG.md
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Expand Up @@ -5,6 +5,13 @@ All notable changes to this project will be documented in this file.
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.0.0/),
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).

## [1.3.1]

### Fixed

- Parsing for ISA Archives met 'ISO-8859-1' encoding but not 'utf-8'
- Specifically, 'utf-8' is attempted and 'ISO-8859-1' is used as a fallback

## [1.3.0]

### Added
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[1.2.0]: https://github.com/j-81/dp_tools/compare/1.1.9...1.2.0
[1.2.1]: https://github.com/j-81/dp_tools/compare/1.2.0...1.2.1
[1.3.0]: https://github.com/j-81/dp_tools/compare/1.2.1...1.3.0
[1.3.1]: https://github.com/j-81/dp_tools/compare/1.3.0...1.3.1
8 changes: 4 additions & 4 deletions dp_tools/__init__.py
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#### Using pip
> pip install git+https://github.com/J-81/[email protected].0
> pip install git+https://github.com/J-81/[email protected].1
## CLI Commands
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``` bash
# First two lines tell Singularity to run the dp_tools container in the current working directory
singularity exec --bind $(pwd):$(pwd) \\
docker://quay.io/j_81/dp_tools:1.3.0 \\
docker://quay.io/j_81/dp_tools:1.3.1 \\
dpt-get-isa-archive --accession GLDS-168 # command we want to run
```
#### Convert ISA Archive into bulkRNASeq Runsheet
``` bash
# First two lines tell Singularity to run the dp_tools container in the current working directory
singularity exec --bind $(pwd):$(pwd) \\
docker://quay.io/j_81/dp_tools:1.3.0 \\
docker://quay.io/j_81/dp_tools:1.3.1 \\
dpt-isa-to-runsheet --accession GLDS-168 \\
--config-type bulkRNASeq \\
--config-version Latest \\
--isa-archive GLDS-168_metadata_GLDS-168-ISA.zip # command we want to run
```
"""
__version__ = "1.3.0"
__version__ = "1.3.1"
2 changes: 1 addition & 1 deletion setup.py
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setup(
name="dp_tools",
version="1.3.0",
version="1.3.1",
description="Tooling for Data Processing Operations",
author="Jonathan Oribello",
author_email="[email protected]",
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