DESCRIPTION

Package: cytofkit
Type: Package
Title: cytofkit: an integrated mass cytometry data analysis pipeline
Version: 0.99.0
Date: 2018-01-19
Author: Jinmiao Chen, Hao Chen, Matthew Myint
Description: An integrated mass cytometry data analysis pipeline that enables
    simultaneous illustration of cellular diversity and progression.
License: Artistic-2.0
Maintainer: Jinmiao Chen <Chen_Jinmiao@immunol.a-star.edu.sg>, Matthew Myint <a0124008@u.nus.edu>
URL: https://github.com/JinmiaoChenLab/cytofkit
BugReports: https://github.com/JinmiaoChenLab/cytofkit/issues
biocViews: FlowCytometry, GUI, CellBiology, Clustering,
    DimensionReduction, BiomedicalInformatics
Depends:
    R (>= 3.4.0), ggplot2, plyr
VignetteBuilder: knitr
Suggests:
    knitr,
    RUnit,
    testthat,
    BiocGenerics
Imports:
    tcltk,
    grDevices,
    graphics,
    utils,
    stats,
    Rtsne,
    e1071,
    flowCore,
    gplots,
    colourpicker,
    VGAM,
    reshape2,
    ggrepel,
    shiny,
    shinyFiles,
    vegan,
    Biobase,
    doParallel,
    parallel,
    pdist,
    methods,
    destiny,
    FlowSOM(>= 1.4.0),
    igraph(>= 1.1.2),
    RANN(>= 2.5),
    Rcpp (>= 0.12.0)
LinkingTo: Rcpp
RoxygenNote: 6.0.1