DESCRIPTION

Package: uSORT
Title: uSORT: A self-refining ordering pipeline for gene selection
Version: 0.99.4
Author: Mai Chan Lau, Hao Chen, Jinmiao Chen
Description: This package is designed to uncover the intrinsic cell progression path from single-cell RNA-seq data. It incorporates data pre-processing, preliminary PCA gene selection, preliminary cell ordering, feature selection, refined cell ordering, and post-analysis interpretation and visualization.
Maintainer: Hao Chen <chen_hao@immunol.a-star.edu.sg>
biocViews: RNASeq, GUI, CellBiology, DNASeq
Depends:
    R (>= 3.3.0),
    tcltk
VignetteBuilder: knitr
Suggests:
    knitr,
    RUnit,
    testthat,
    ggplot2
Imports:
    igraph,
    Matrix,
    RANN,
    RSpectra,
    VGAM,
    gplots,
    parallel,
    plyr,
    methods,
    cluster,
    Biobase,
    fpc,
    BiocGenerics,
    monocle,
    grDevices,
    graphics,
    stats,
    utils
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
RoxygenNote: 5.0.1