Change the image acquisition behaviour of NiftiImage #20
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| name: Code Analysis | |
| on: [push, pull_request] | |
| jobs: | |
| Code-Analysis: | |
| runs-on: ubuntu-20.04 | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Install Cppcheck | |
| run: | | |
| sudo apt-get update && sudo apt-get install libpcre3-dev | |
| git clone https://github.com/danmar/cppcheck.git | |
| cd cppcheck | |
| git checkout 2.13.x | |
| # Disable color output of cppcheck | |
| sed -i 's/ *bool *gDisableColors *= *false;/bool gDisableColors = true;/' lib/color.cpp | |
| sudo make -j4 MATCHCOMPILER=yes FILESDIR=/usr/share/cppcheck HAVE_RULES=yes CXXFLAGS="-O2 -DNDEBUG -Wall -Wno-sign-compare -Wno-unused-function" install | |
| - name: Install Python dependencies | |
| run: pip3 install --upgrade setuptools urllib3 chardet pyOpenSSL pygithub | |
| - name: Install CUDA Toolkit | |
| uses: Jimver/[email protected] | |
| with: | |
| method: network | |
| use-github-cache: false | |
| use-local-cache: false | |
| - name: Configure NiftyReg | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake -DCMAKE_C_COMPILER=gcc \ | |
| -DCMAKE_CXX_COMPILER=g++ \ | |
| -DCMAKE_BUILD_TYPE=Debug \ | |
| -DBUILD_ALL_DEP=ON \ | |
| -DCHECK_GPU=OFF \ | |
| -DUSE_CUDA=ON \ | |
| -DUSE_OPENCL=ON \ | |
| -DUSE_SSE=ON \ | |
| -DUSE_OPENMP=ON \ | |
| -DBUILD_TESTING=OFF \ | |
| -DWITH_COVERAGE=OFF \ | |
| -DCMAKE_EXPORT_COMPILE_COMMANDS=ON \ | |
| .. | |
| - name: Code Analysis | |
| env: | |
| COMMENT_TITLE: Code Analysis Results | |
| GITHUB_TOKEN: ${{ github.token }} | |
| PR_NUMBER: ${{ github.event.pull_request.number }} | |
| REPO: ${{ github.repository }} | |
| REPORT_PR_CHANGES_ONLY: false | |
| run: | | |
| analysis_file="analysis.txt" | |
| cppcheck_params="--enable=warning --check-level=exhaustive --inline-suppr --suppress=internalError --suppress=internalAstError --suppress=*:*third-party/Eigen/*" | |
| cppcheck -j4 $cppcheck_params --project=$(pwd)/build/compile_commands.json --output-file=$analysis_file | |
| # Since cppcheck does not support OpenCL and CUDA, we need to check these files separately | |
| find $(pwd)/reg-lib/cl/. -name "*.cl" -print0 | while IFS= read -r -d '' file; do cppcheck "$file" $cppcheck_params --language=c++ 2>> $analysis_file; done | |
| find $(pwd)/reg-lib/cuda/. -name "*.cu" -print0 | while IFS= read -r -d '' file; do cppcheck "$file" $cppcheck_params --language=c++ 2>> $analysis_file; done | |
| python3 .github/code_analysis.py -cc $analysis_file -o ${{ github.event_name == 'push' }} -fk false |